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Meta-Analysis of All Published SZ Association Studies (Case-Control Only) rs10108011
Back Search Methods Disclaimer Credits
 Polymorphism: rs10108011 (hCV1341817)
 Gene: PPP3CC  (CALNA3)  Entrez Gene
 Protein: protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform (calcineurin A gamma)  (calcineurin A gamma; Protein phosphatase-3 (formerly 2B), catalytic subunit, gamma isoform)  ProteinLink
 Chromosome: 8   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 22 October 2010
Gene Overview
 Polymorphism:
1) Summary of Allele and Genotype Distribution of all Published Association Studies (by Ethnic Group)
      Alleles Genotypes
  # Case-Control
Samples		   G-Allele
(frequency)		 A-Allele
(frequency)		 G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian 1 SZ
CTR		 0.45
0.44		 0.55
0.56		 384 (0.205)
386 (0.193)		 927 (0.495)
986 (0.493)		 560 (0.299)
630 (0.315)
 Asian 3 SZ
CTR		 0.30
0.28		 0.70
0.73		 231 (0.095)
193 (0.078)		 991 (0.407)
971 (0.394)		 1211 (0.498)
1299 (0.527)
Total 4 SZ
CTR		 0.37
0.35		 0.63
0.65		 615 (0.143)
579 (0.130)		 1918 (0.446)
1957 (0.438)		 1771 (0.411)
1929 (0.432)

Meta-Analysis Methods      * New * Cumulative Meta-analysis
2) Forest plot for polymorphism  rs10108011 (hCV1341817)

Please also see disclaimer for more information on these meta-analyses.

Meta-analyses have not been performed on the following polymorphisms since they lack published genotype data in at least four independent case-control samples, or the published genotype data was otherwise not eligible for inclusion (see methods for details):

rs1049437
rs1116085
rs12544288
rs1482337
rs1530874
rs17060857
rs17671456
rs17733242
rs17733355
rs1809103
rs2252471
rs2272080
rs2443502
rs2449338
rs2449340
rs2449348 (hCV3004214)
rs2461483
rs2461489
rs2461490
rs2469745
rs2469747
rs2469749
rs2469757
rs2469758
rs2469768
rs2469769
rs2469770
rs4871998
rs7430
rs7431
rs7812987
rs7821470 (hCV1341797)
rs7827093
rs7827118
rs7833266
rs7837713

SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
ALSGene
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MSGene
PDGene
SZGene
An up-to-date collection of all published genetic association studies.
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