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Meta-Analysis of All Published SZ Association Studies (Case-Control Only) rs876797
Back Search Methods Disclaimer Credits
 Polymorphism: rs876797
 Gene: FXYD6   Entrez Gene
 Protein: FXYD domain-containing ion transport regulator 6  (phosphohippolin)  ProteinLink
 Chromosome: 11   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 21 October 2010
Gene Overview
 Polymorphism:
1) Summary of Allele and Genotype Distribution of all Published Association Studies (by Ethnic Group)
      Alleles Genotypes
  # Case-Control
Samples
  A-Allele
(frequency)
C-Allele
(frequency)
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian 2 SZ
CTR
0.21
0.23
0.79
0.77
54 (0.043)
53 (0.053)
415 (0.328)
352 (0.353)
796 (0.629)
591 (0.593)
 Asian 2 SZ
CTR
0.28
0.28
0.72
0.72
187 (0.079)
207 (0.082)
942 (0.398)
1012 (0.401)
1237 (0.523)
1307 (0.517)
Total 4 SZ
CTR
0.25
0.27
0.75
0.73
241 (0.066)
260 (0.074)
1357 (0.374)
1364 (0.387)
2033 (0.560)
1898 (0.539)

Meta-Analysis Methods      * New * Cumulative Meta-analysis
2) Forest plot for polymorphism  rs876797

Please also see disclaimer for more information on these meta-analyses.


Meta-analyses have not been performed on the following polymorphisms since they lack published genotype data in at least four independent case-control samples, or the published genotype data was otherwise not eligible for inclusion (see methods for details):

FXYD6_TTTC20.2
rs10790212
rs10790218
rs10892181
rs10892185
rs11216573
rs11216591
rs11216594
rs11216598
rs11605223
rs11608153
rs12363888
rs1815774
rs2019655
rs2282506
rs3087563
rs3168238
rs3809042
rs3809043
rs3809044
rs476130
rs4938446
rs496371
rs512481
rs520333
rs555577
rs564989
rs631898
rs7119090
rs7121573
rs873713
rs876798

SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
ALSGene
AlzGene
MSGene
PDGene
SZGene
An up-to-date collection of all published genetic association studies.
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