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Gene: |
DTNBP1
(SDY; DBND; HPS7; My031; FLJ30031; MGC20210)
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Status: |
Updated 21 October 2010
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Total number of polymorphisms investigated by this study: 20 |
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs1047631 (SNP-P)
|
UK, Ireland |
SZ CTR |
0.14 0.12 |
0.86 0.88 |
12 (0.018) 9 (0.014) |
153 (0.235) 136 (0.215) |
486 (0.747) 488 (0.771) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs2005976 (P1757)
|
UK, Ireland |
SZ CTR |
0.19 0.19 |
0.81 0.81 |
24 (0.035) 26 (0.037) |
210 (0.304) 219 (0.312) |
457 (0.661) 457 (0.651) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs2619539 (P1655)
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs2619539 (P1655)
|
Overlaps with Morris, 2003 |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs3213207 (P1635)
|
Overlaps with Morris, 2003 |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs3213207 (P1635)
|
UK, Ireland |
SZ CTR |
0.11 0.11 |
0.89 0.89 |
8 (0.012) 9 (0.013) |
131 (0.196) 137 (0.195) |
531 (0.793) 555 (0.792) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details). *Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs1011313 (P1325)
|
UK, Ireland |
SZ CTR |
0.10 0.09 |
0.90 0.91 |
7 (0.010) 6 (0.009) |
123 (0.180) 114 (0.164) |
555 (0.810) 575 (0.827) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
DTNBP1_SNP-B
|
UK, Ireland |
SZ CTR |
0.19 0.17 |
0.81 0.83 |
19 (0.036) 15 (0.029) |
161 (0.308) 147 (0.282) |
342 (0.655) 360 (0.690) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
DTNBP1_SNP-D
|
UK, Ireland |
SZ CTR |
0.13 0.16 |
0.87 0.84 |
10 (0.016) 14 (0.027) |
141 (0.223) 140 (0.268) |
481 (0.761) 368 (0.705) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
DTNBP1_SNP-F
|
UK, Ireland |
SZ CTR |
0.25 0.27 |
0.75 0.73 |
32 (0.061) 38 (0.073) |
196 (0.375) 206 (0.395) |
294 (0.563) 278 (0.533) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
DTNBP1_SNP-G
|
UK, Ireland |
SZ CTR |
0.27 0.28 |
0.73 0.72 |
38 (0.073) 41 (0.079) |
206 (0.395) 210 (0.402) |
278 (0.533) 271 (0.519) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
DTNBP1_SNP-H
|
UK, Ireland |
SZ CTR |
0.07 0.06 |
0.93 0.94 |
3 (0.006) 2 (0.004) |
68 (0.130) 59 (0.113) |
451 (0.864) 461 (0.883) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
DTNBP1_SNP-I
|
UK, Ireland |
SZ CTR |
0.15 0.13 |
0.85 0.87 |
12 (0.023) 9 (0.017) |
133 (0.255) 118 (0.226) |
377 (0.722) 395 (0.757) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
DTNBP1_SNP-J
|
UK, Ireland |
SZ CTR |
0.10 0.12 |
0.90 0.88 |
7 (0.010) 9 (0.014) |
121 (0.180) 138 (0.212) |
546 (0.810) 505 (0.775) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
DTNBP1_SNP-K
|
UK, Ireland |
SZ CTR |
0.15 0.14 |
0.85 0.86 |
12 (0.023) 10 (0.019) |
133 (0.255) 126 (0.241) |
377 (0.722) 386 (0.739) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
DTNBP1_SNP-M
|
UK, Ireland |
SZ CTR |
0.12 0.13 |
0.88 0.87 |
9 (0.014) 11 (0.017) |
138 (0.212) 147 (0.227) |
505 (0.775) 491 (0.757) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
DTNBP1_SNP-N
|
UK, Ireland |
SZ CTR |
0.04 0.04 |
0.96 0.96 |
1 (0.002) 1 (0.002) |
40 (0.077) 40 (0.077) |
481 (0.921) 481 (0.921) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
DTNBP1_SNP-O
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
A-Allele |
T/T (frequency) |
T/A (frequency) |
A/A (frequency) |
Caucasian |
rs2619538 (SNP-A)
|
Ireland (II) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs2619538 (SNP-A)
|
UK, Ireland |
SZ CTR |
0.43 0.47 |
0.57 0.53 |
110 (0.184) 123 (0.243) |
293 (0.491) 227 (0.449) |
194 (0.325) 156 (0.308) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details). *Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs2743852 (SNP-C)
|
UK, Ireland |
SZ CTR |
0.10 0.08 |
0.90 0.92 |
6 (0.010) 4 (0.007) |
112 (0.181) 87 (0.146) |
502 (0.810) 503 (0.847) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs3829893 (SNP-L)
|
UK, Ireland |
SZ CTR |
0.16 0.15 |
0.84 0.85 |
13 (0.025) 12 (0.023) |
140 (0.269) 132 (0.254) |
367 (0.706) 376 (0.723) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs909706 (P1583)
|
UK, Ireland |
SZ CTR |
0.40 0.37 |
0.60 0.63 |
83 (0.159) 72 (0.138) |
251 (0.481) 243 (0.466) |
188 (0.360) 207 (0.397) |
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