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Printable version
Polymorphism Details
Study:
Treutlein, 2009
Gene:
GRID1
Protein:
glutamate receptor, ionotropic, delta 1
Chromosome:
10
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 16 April 2009
Total number of polymorphisms investigated by this study: 23
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
m-Allele
M-Allele
m/m
(frequency)
m/M
(frequency)
M/M
(frequency)
Caucasian
rs999383
Germany
SZ
CTR
0.33
0.32
0.67
0.68
99 (0.108)
81 (0.105)
405 (0.441)
339 (0.439)
415 (0.452)
353 (0.457)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
m-Allele
M-Allele
m/m
(frequency)
m/M
(frequency)
M/M
(frequency)
Caucasian
rs1902666
Germany
SZ
CTR
0.11
0.13
0.89
0.87
11 (0.012)
12 (0.016)
181 (0.197)
170 (0.220)
727 (0.791)
591 (0.765)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs11591408
Germany
SZ
CTR
0.37
0.36
0.63
0.64
124 (0.135)
103 (0.133)
427 (0.465)
358 (0.463)
368 (0.400)
312 (0.404)
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs10509530
Germany
SZ
CTR
0.16
0.18
0.84
0.82
24 (0.026)
25 (0.032)
251 (0.273)
229 (0.296)
644 (0.701)
519 (0.671)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs10749535
Germany
SZ
CTR
0.47
0.43
0.53
0.57
203 (0.221)
144 (0.186)
458 (0.498)
379 (0.490)
258 (0.281)
250 (0.323)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
C-Allele
G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
Caucasian
rs10788494
Germany
SZ
CTR
0.49
0.52
0.51
0.48
218 (0.237)
207 (0.268)
459 (0.499)
386 (0.499)
242 (0.263)
180 (0.233)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
C-Allele
G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
Caucasian
rs10887578
Germany
SZ
CTR
0.49
0.52
0.51
0.48
218 (0.237)
208 (0.269)
459 (0.499)
386 (0.499)
242 (0.263)
179 (0.232)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Caucasian
rs10887579
Germany
SZ
CTR
0.38
0.36
0.62
0.64
135 (0.147)
101 (0.131)
435 (0.473)
357 (0.462)
349 (0.380)
315 (0.408)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs10887583
Germany
SZ
CTR
0.13
0.13
0.87
0.87
15 (0.016)
13 (0.017)
202 (0.220)
177 (0.229)
702 (0.764)
583 (0.754)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs11201985
Germany
SZ
CTR
0.47
0.43
0.53
0.57
202 (0.220)
142 (0.184)
458 (0.498)
379 (0.490)
259 (0.282)
252 (0.326)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs11201988
Germany
SZ
CTR
0.14
0.13
0.86
0.87
19 (0.021)
14 (0.018)
225 (0.245)
179 (0.232)
675 (0.734)
580 (0.750)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Caucasian
rs11202014
Germany
SZ
CTR
0.25
0.28
0.75
0.72
59 (0.064)
59 (0.076)
348 (0.379)
310 (0.401)
512 (0.557)
404 (0.523)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs17106600
Germany
SZ
CTR
0.13
0.15
0.87
0.85
16 (0.017)
18 (0.023)
212 (0.231)
201 (0.260)
691 (0.752)
554 (0.717)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs1863823
Germany
SZ
CTR
0.15
0.17
0.85
0.83
20 (0.022)
21 (0.027)
232 (0.252)
214 (0.277)
667 (0.726)
538 (0.696)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs1863826
Germany
SZ
CTR
0.29
0.31
0.71
0.69
80 (0.087)
76 (0.098)
382 (0.416)
333 (0.431)
457 (0.497)
364 (0.471)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs2018507
Germany
SZ
CTR
0.35
0.38
0.65
0.62
113 (0.123)
109 (0.141)
419 (0.456)
363 (0.470)
387 (0.421)
301 (0.389)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs2217223
Germany
SZ
CTR
0.33
0.34
0.67
0.66
100 (0.109)
92 (0.119)
406 (0.442)
349 (0.451)
413 (0.449)
332 (0.429)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs3814614
Germany
SZ
CTR
0.50
0.46
0.50
0.54
233 (0.254)
166 (0.215)
460 (0.501)
385 (0.498)
226 (0.246)
222 (0.287)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs4454627
Germany
SZ
CTR
0.16
0.18
0.84
0.82
25 (0.027)
26 (0.034)
252 (0.274)
231 (0.299)
642 (0.699)
516 (0.668)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs4933391
Germany
SZ
CTR
0.39
0.36
0.61
0.64
137 (0.149)
101 (0.131)
436 (0.474)
357 (0.462)
346 (0.376)
315 (0.408)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs4934199
Germany
SZ
CTR
0.23
0.21
0.77
0.79
49 (0.053)
33 (0.043)
328 (0.357)
253 (0.327)
542 (0.590)
487 (0.630)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs733013
Germany
SZ
CTR
0.12
0.11
0.88
0.89
13 (0.014)
10 (0.013)
193 (0.210)
155 (0.201)
713 (0.776)
608 (0.787)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs7907234
Germany
SZ
CTR
0.11
0.10
0.89
0.90
10 (0.011)
8 (0.010)
173 (0.188)
140 (0.181)
736 (0.801)
625 (0.809)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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