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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Shibata, 2009
 Gene: GRM7  (GLUR7; mGlu7; GPRC1G; MGLUR7)  Entrez Gene    View on MSGene
 Protein: glutamate receptor, metabotropic 7   ProteinLink
 Chromosome: 3   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 30 December 2009
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 43

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele A-Allele T/T
(frequency)		 T/A
(frequency)		 A/A
(frequency)
 Asian
rs2229902 (Tyr433Phe) Overlaps with Ohtsuki, 2008 SZ
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs3749380 Overlaps with Ohtsuki, 2008 SZ
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs1485175 Overlaps with Ohtsuki, 2008 SZ
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs1485174 Overlaps with Ohtsuki, 2008 SZ
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele C-Allele G/G
(frequency)		 G/C
(frequency)		 C/C
(frequency)
 Asian
rs9883277 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.47
0.48		 0.54
0.52		 19 (0.190)
21 (0.210)		 55 (0.550)
54 (0.540)		 26 (0.260)
25 (0.250)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs882226 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.19
0.24		 0.82
0.76		 4 (0.040)
4 (0.040)		 29 (0.290)
40 (0.400)		 67 (0.670)
56 (0.560)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs779746 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.46
0.48		 0.55
0.52		 24 (0.240)
18 (0.180)		 43 (0.430)
60 (0.600)		 33 (0.330)
22 (0.220)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs712778 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.43
0.46		 0.58
0.54		 17 (0.170)
20 (0.200)		 51 (0.510)
52 (0.520)		 32 (0.320)
28 (0.280)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs712767 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.56
0.49		 0.45
0.51		 30 (0.300)
26 (0.260)		 51 (0.510)
46 (0.460)		 19 (0.190)
28 (0.280)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs6806817 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.44
0.46		 0.57
0.55		 17 (0.170)
18 (0.180)		 53 (0.530)
55 (0.550)		 30 (0.300)
27 (0.270)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs535146 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.45
0.46		 0.55
0.55		 17 (0.170)
20 (0.200)		 56 (0.560)
51 (0.510)		 27 (0.270)
29 (0.290)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Asian
rs490239 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.40
0.43		 0.61
0.57		 14 (0.140)
15 (0.150)		 51 (0.510)
56 (0.560)		 35 (0.350)
29 (0.290)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs4686101 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.25
0.25		 0.76
0.76		 5 (0.050)
6 (0.060)		 39 (0.390)
37 (0.370)		 56 (0.560)
57 (0.570)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele G-Allele C/C
(frequency)		 C/G
(frequency)		 G/G
(frequency)
 Asian
rs3804846 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.17
0.17		 0.83
0.83		 4 (0.040)
1 (0.010)		 26 (0.260)
32 (0.320)		 70 (0.700)
67 (0.670)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs3792454 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.40
0.43		 0.60
0.58		 15 (0.150)
13 (0.130)		 50 (0.500)
59 (0.590)		 35 (0.350)
28 (0.280)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs342016 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.17
0.16		 0.83
0.84		 4 (0.040)
0 (0.000)		 26 (0.260)
32 (0.320)		 70 (0.700)
68 (0.680)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs323482 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.32
0.32		 0.69
0.68		 9 (0.090)
13 (0.130)		 45 (0.450)
38 (0.380)		 46 (0.460)
49 (0.490)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Asian
rs2133450 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.44
0.41		 0.56
0.60		 21 (0.210)
18 (0.180)		 46 (0.460)
45 (0.450)		 33 (0.330)
37 (0.370)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs2063882 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.31
0.31		 0.70
0.70		 7 (0.070)
5 (0.050)		 47 (0.470)
51 (0.510)		 46 (0.460)
44 (0.440)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs2055737 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.22
0.15		 0.79
0.85		 5 (0.050)
1 (0.010)		 33 (0.330)
28 (0.280)		 62 (0.620)
71 (0.710)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs1603876 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.45
0.50		 0.56
0.51		 17 (0.170)
22 (0.220)		 55 (0.550)
55 (0.550)		 28 (0.280)
23 (0.230)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs1569286 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.37
0.40		 0.63
0.61		 17 (0.170)
14 (0.140)		 40 (0.400)
51 (0.510)		 43 (0.430)
35 (0.350)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Asian
rs1568075 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.22
0.25		 0.78
0.75		 4 (0.040)
9 (0.090)		 36 (0.360)
32 (0.320)		 60 (0.600)
59 (0.590)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele T-Allele A/A
(frequency)		 A/T
(frequency)		 T/T
(frequency)
 Asian
rs1566367 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.42
0.48		 0.59
0.52		 17 (0.170)
24 (0.240)		 49 (0.490)
48 (0.480)		 34 (0.340)
28 (0.280)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs1543146 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.24
0.17		 0.77
0.83		 9 (0.090)
1 (0.010)		 29 (0.290)
32 (0.320)		 62 (0.620)
67 (0.670)


Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs1508722 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.46
0.42		 0.54
0.58		 86 (0.213)
74 (0.176)		 201 (0.498)
204 (0.486)		 117 (0.290)
142 (0.338)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs1508707 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.38
0.34		 0.63
0.67		 15 (0.150)
8 (0.080)		 45 (0.450)
51 (0.510)		 40 (0.400)
41 (0.410)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs1504045 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.38
0.34		 0.62
0.67		 15 (0.150)
14 (0.140)		 46 (0.460)
39 (0.390)		 39 (0.390)
47 (0.470)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs1499149 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.44
0.47		 0.56
0.54		 20 (0.200)
24 (0.240)		 48 (0.480)
45 (0.450)		 32 (0.320)
31 (0.310)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs1499077 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.41
0.44		 0.60
0.56		 16 (0.160)
23 (0.230)		 49 (0.490)
42 (0.420)		 35 (0.350)
35 (0.350)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs1485179 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.32
0.33		 0.69
0.67		 12 (0.120)
14 (0.140)		 39 (0.390)
38 (0.380)		 49 (0.490)
48 (0.480)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs1485170 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.28
0.31		 0.73
0.69		 9 (0.090)
7 (0.070)		 37 (0.370)
48 (0.480)		 54 (0.540)
45 (0.450)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele C-Allele A/A
(frequency)		 A/C
(frequency)		 C/C
(frequency)
 Asian
rs1450099 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.25
0.22		 0.76
0.79		 9 (0.090)
1 (0.010)		 31 (0.310)
41 (0.410)		 60 (0.600)
58 (0.580)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs1396409 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.52
0.49		 0.49
0.51		 30 (0.300)
20 (0.200)		 43 (0.430)
58 (0.580)		 27 (0.270)
22 (0.220)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs1396404 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.40
0.38		 0.60
0.62		 21 (0.210)
16 (0.160)		 38 (0.380)
44 (0.440)		 41 (0.410)
40 (0.400)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs1391947 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.34
0.34		 0.67
0.66		 11 (0.110)
14 (0.140)		 45 (0.450)
40 (0.400)		 44 (0.440)
46 (0.460)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs1354407 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.30
0.35		 0.71
0.66		 6 (0.060)
14 (0.140)		 47 (0.470)
41 (0.410)		 47 (0.470)
45 (0.450)


Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele G-Allele C/C
(frequency)		 C/G
(frequency)		 G/G
(frequency)
 Asian
rs12491620 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.32
0.36		 0.68
0.64		 42 (0.104)
54 (0.129)		 176 (0.436)
194 (0.462)		 186 (0.460)
172 (0.410)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Asian
rs1240966 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.31
0.23		 0.70
0.78		 10 (0.100)
7 (0.070)		 41 (0.410)
31 (0.310)		 49 (0.490)
62 (0.620)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele A-Allele T/T
(frequency)		 T/A
(frequency)		 A/A
(frequency)
 Asian
rs11915789 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.31
0.30		 0.70
0.70		 9 (0.090)
9 (0.090)		 43 (0.430)
42 (0.420)		 48 (0.480)
49 (0.490)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs11719710 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.35
0.32		 0.66
0.69		 13 (0.130)
8 (0.080)		 43 (0.430)
47 (0.470)		 44 (0.440)
45 (0.450)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs11710715 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.38
0.40		 0.62
0.61		 13 (0.130)
20 (0.200)		 50 (0.500)
39 (0.390)		 37 (0.370)
41 (0.410)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs1021687 Overlaps with Ohtsuki, 2008 SZ
CTR		 0.43
0.45		 0.57
0.55		 17 (0.170)
18 (0.180)		 52 (0.520)
54 (0.540)		 31 (0.310)
28 (0.280)
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