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Printable version
Polymorphism Details
Study:
Djurovic, 2009
Gene:
GRIK3
(EAA5; GLR7; GLUR7; GluR7a)
View on MSGene
Protein:
glutamate receptor 7
(excitatory amino acid receptor 5)
Chromosome:
1
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 22 October 2010
Total number of polymorphisms investigated by this study: 29
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs1160751
Norway
SZ
CTR
0.33
0.30
0.67
0.70
18 (0.110)
16 (0.090)
72 (0.439)
75 (0.424)
74 (0.451)
86 (0.486)
rs1160751
Denmark
SZ
CTR
0.32
0.33
0.68
0.67
44 (0.105)
108 (0.108)
184 (0.439)
442 (0.440)
191 (0.456)
454 (0.452)
rs1160751
Sweden
SZ
CTR
0.29
0.26
0.71
0.74
21 (0.082)
19 (0.065)
105 (0.409)
111 (0.380)
131 (0.510)
162 (0.555)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs1334804
Norway
SZ
CTR
0.07
0.10
0.93
0.90
1 (0.006)
2 (0.011)
22 (0.135)
33 (0.186)
140 (0.859)
142 (0.802)
rs1334804
Denmark
SZ
CTR
0.12
0.13
0.88
0.87
6 (0.014)
16 (0.016)
88 (0.210)
223 (0.222)
325 (0.776)
765 (0.762)
rs1334804
Sweden
SZ
CTR
0.10
0.08
0.90
0.92
2 (0.008)
2 (0.007)
45 (0.176)
45 (0.154)
209 (0.816)
245 (0.839)
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs12067006
Norway
SZ
CTR
0.29
0.20
0.71
0.80
13 (0.080)
7 (0.040)
67 (0.411)
56 (0.316)
83 (0.509)
114 (0.644)
rs12067006
Denmark
SZ
CTR
0.26
0.26
0.74
0.74
28 (0.067)
66 (0.066)
161 (0.384)
383 (0.381)
230 (0.549)
555 (0.553)
rs12067006
Sweden
SZ
CTR
0.27
0.25
0.73
0.75
18 (0.070)
18 (0.062)
101 (0.393)
110 (0.377)
138 (0.537)
164 (0.562)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
G-Allele
C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
Caucasian
rs12132499
Norway
SZ
CTR
0.05
0.07
0.95
0.93
0 (0.000)
1 (0.006)
17 (0.105)
23 (0.130)
145 (0.895)
153 (0.864)
rs12132499
Denmark
SZ
CTR
0.07
0.06
0.93
0.94
2 (0.005)
4 (0.004)
56 (0.134)
115 (0.114)
361 (0.862)
886 (0.882)
rs12132499
Sweden
SZ
CTR
0.07
0.06
0.93
0.94
1 (0.004)
1 (0.003)
34 (0.133)
34 (0.116)
221 (0.863)
257 (0.880)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs12133182
Norway
SZ
CTR
0.17
0.14
0.83
0.86
5 (0.030)
3 (0.017)
46 (0.280)
42 (0.239)
113 (0.689)
131 (0.744)
rs12133182
Denmark
SZ
CTR
0.12
0.15
0.88
0.85
6 (0.014)
23 (0.023)
88 (0.210)
257 (0.256)
325 (0.776)
724 (0.721)
rs12133182
Sweden
SZ
CTR
0.11
0.13
0.89
0.87
3 (0.012)
5 (0.017)
52 (0.203)
68 (0.234)
201 (0.785)
218 (0.749)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs1587526
Norway
SZ
CTR
0.05
0.08
0.95
0.92
0 (0.000)
1 (0.006)
17 (0.104)
27 (0.153)
146 (0.896)
149 (0.842)
rs1587526
Denmark
SZ
CTR
0.07
0.08
0.93
0.92
2 (0.005)
7 (0.007)
58 (0.139)
151 (0.150)
358 (0.856)
846 (0.843)
rs1587526
Sweden
SZ
CTR
0.08
0.07
0.92
0.93
2 (0.008)
2 (0.007)
39 (0.152)
39 (0.133)
216 (0.840)
252 (0.860)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs16823687
Norway
SZ
CTR
0.17
0.18
0.83
0.82
5 (0.031)
6 (0.034)
46 (0.282)
52 (0.294)
112 (0.687)
119 (0.672)
rs16823687
Denmark
SZ
CTR
0.21
0.20
0.79
0.80
18 (0.043)
40 (0.040)
137 (0.326)
321 (0.320)
265 (0.631)
643 (0.640)
rs16823687
Sweden
SZ
CTR
0.18
0.20
0.82
0.80
9 (0.035)
12 (0.041)
77 (0.300)
93 (0.318)
171 (0.665)
187 (0.640)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs17461259
Norway
SZ
CTR
0.07
0.08
0.93
0.92
1 (0.006)
1 (0.006)
20 (0.122)
27 (0.153)
143 (0.872)
148 (0.841)
rs17461259
Denmark
SZ
CTR
0.05
0.07
0.95
0.93
1 (0.002)
5 (0.005)
39 (0.093)
131 (0.130)
379 (0.905)
868 (0.865)
rs17461259
Sweden
SZ
CTR
0.06
0.09
0.94
0.91
1 (0.004)
2 (0.007)
31 (0.121)
47 (0.161)
225 (0.875)
243 (0.832)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs1762067
Norway
SZ
CTR
0.06
0.04
0.94
0.96
1 (0.006)
0 (0.000)
19 (0.116)
15 (0.085)
144 (0.878)
161 (0.915)
rs1762067
Denmark
SZ
CTR
0.07
0.06
0.93
0.94
2 (0.005)
3 (0.003)
58 (0.139)
109 (0.109)
358 (0.856)
892 (0.888)
rs1762067
Sweden
SZ
CTR
0.06
0.05
0.94
0.95
1 (0.004)
1 (0.003)
27 (0.105)
29 (0.099)
229 (0.891)
262 (0.897)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs3753776
Norway
SZ
CTR
0.37
0.34
0.63
0.66
23 (0.141)
20 (0.113)
76 (0.466)
79 (0.446)
64 (0.393)
78 (0.441)
rs3753776
Denmark
SZ
CTR
0.37
0.36
0.63
0.64
58 (0.139)
131 (0.130)
196 (0.469)
463 (0.461)
164 (0.392)
410 (0.408)
rs3753776
Sweden
SZ
CTR
0.36
0.36
0.64
0.64
33 (0.129)
38 (0.130)
118 (0.461)
134 (0.459)
105 (0.410)
120 (0.411)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
A-Allele
T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
Caucasian
rs3767042
Norway
SZ
CTR
0.15
0.15
0.85
0.85
4 (0.025)
4 (0.022)
42 (0.258)
45 (0.253)
117 (0.718)
129 (0.725)
rs3767042
Denmark
SZ
CTR
0.16
0.15
0.84
0.85
11 (0.026)
22 (0.022)
115 (0.274)
256 (0.255)
293 (0.699)
726 (0.723)
rs3767042
Sweden
SZ
CTR
0.17
0.16
0.83
0.84
7 (0.027)
8 (0.027)
72 (0.281)
80 (0.274)
177 (0.691)
204 (0.699)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs3767080
Norway
SZ
CTR
0.35
0.33
0.65
0.67
20 (0.122)
19 (0.107)
74 (0.451)
78 (0.441)
70 (0.427)
80 (0.452)
rs3767080
Denmark
SZ
CTR
0.32
0.31
0.68
0.69
42 (0.100)
99 (0.099)
182 (0.434)
432 (0.430)
195 (0.465)
473 (0.471)
rs3767080
Sweden
SZ
CTR
0.31
0.29
0.69
0.71
25 (0.097)
24 (0.082)
111 (0.432)
119 (0.409)
121 (0.471)
148 (0.509)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Caucasian
rs3767081
Norway
SZ
CTR
0.39
0.38
0.61
0.62
25 (0.152)
26 (0.147)
78 (0.476)
84 (0.475)
61 (0.372)
67 (0.379)
rs3767081
Denmark
SZ
CTR
0.37
0.38
0.63
0.62
58 (0.138)
145 (0.144)
196 (0.468)
473 (0.471)
165 (0.394)
386 (0.384)
rs3767081
Sweden
SZ
CTR
0.37
0.35
0.63
0.65
35 (0.136)
35 (0.120)
120 (0.465)
132 (0.454)
103 (0.399)
124 (0.426)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs3820274
Norway
SZ
CTR
0.05
0.06
0.95
0.94
0 (0.000)
1 (0.006)
16 (0.099)
18 (0.102)
146 (0.901)
158 (0.893)
rs3820274
Denmark
SZ
CTR
0.08
0.08
0.92
0.92
2 (0.005)
7 (0.007)
59 (0.141)
156 (0.155)
357 (0.854)
841 (0.838)
rs3820274
Sweden
SZ
CTR
0.07
0.09
0.93
0.91
1 (0.004)
2 (0.007)
33 (0.128)
48 (0.164)
223 (0.868)
242 (0.829)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs4652931
Norway
SZ
CTR
0.31
0.26
0.69
0.74
16 (0.098)
12 (0.068)
70 (0.429)
68 (0.384)
77 (0.472)
97 (0.548)
rs4652931
Denmark
SZ
CTR
0.25
0.25
0.75
0.75
27 (0.064)
62 (0.062)
159 (0.379)
374 (0.372)
233 (0.556)
569 (0.566)
rs4652931
Sweden
SZ
CTR
0.27
0.24
0.73
0.76
19 (0.074)
17 (0.058)
102 (0.398)
107 (0.366)
135 (0.527)
168 (0.575)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs472188
Norway
SZ
CTR
0.16
0.10
0.84
0.90
4 (0.025)
2 (0.011)
45 (0.276)
31 (0.174)
114 (0.699)
145 (0.815)
rs472188
Denmark
SZ
CTR
0.14
0.13
0.86
0.87
8 (0.019)
17 (0.017)
100 (0.239)
226 (0.225)
311 (0.742)
762 (0.758)
rs472188
Sweden
SZ
CTR
0.11
0.10
0.89
0.90
3 (0.012)
3 (0.010)
52 (0.203)
50 (0.171)
201 (0.785)
240 (0.819)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs478273
Norway
SZ
CTR
0.07
0.08
0.93
0.92
1 (0.006)
1 (0.006)
20 (0.122)
28 (0.158)
143 (0.872)
148 (0.836)
rs478273
Denmark
SZ
CTR
0.10
0.10
0.90
0.90
4 (0.010)
10 (0.010)
74 (0.177)
180 (0.179)
341 (0.814)
814 (0.811)
rs478273
Sweden
SZ
CTR
0.10
0.09
0.90
0.91
3 (0.012)
2 (0.007)
47 (0.183)
48 (0.165)
207 (0.805)
241 (0.828)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs481047
Norway
SZ
CTR
0.13
0.17
0.87
0.83
3 (0.018)
5 (0.028)
38 (0.233)
50 (0.282)
122 (0.748)
122 (0.689)
rs481047
Denmark
SZ
CTR
0.17
0.17
0.83
0.83
12 (0.029)
30 (0.030)
116 (0.276)
286 (0.285)
292 (0.695)
689 (0.686)
rs481047
Sweden
SZ
CTR
0.15
0.13
0.85
0.87
6 (0.023)
5 (0.017)
66 (0.257)
68 (0.233)
185 (0.720)
219 (0.750)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs493243
Norway
SZ
CTR
0.13
0.10
0.87
0.90
3 (0.018)
2 (0.011)
36 (0.220)
30 (0.169)
125 (0.762)
146 (0.820)
rs493243
Denmark
SZ
CTR
0.12
0.11
0.88
0.89
6 (0.014)
13 (0.013)
89 (0.212)
200 (0.199)
324 (0.773)
791 (0.788)
rs493243
Sweden
SZ
CTR
0.10
0.10
0.90
0.90
2 (0.008)
3 (0.010)
45 (0.176)
51 (0.175)
209 (0.816)
238 (0.815)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs494070
Norway
SZ
CTR
0.16
0.14
0.84
0.86
4 (0.025)
3 (0.017)
43 (0.264)
42 (0.239)
116 (0.712)
131 (0.744)
rs494070
Denmark
SZ
CTR
0.16
0.17
0.84
0.83
11 (0.026)
27 (0.027)
113 (0.269)
277 (0.276)
296 (0.705)
699 (0.697)
rs494070
Sweden
SZ
CTR
0.17
0.14
0.83
0.86
7 (0.027)
6 (0.021)
72 (0.281)
72 (0.247)
177 (0.691)
214 (0.733)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
G-Allele
C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
Caucasian
rs507460
Norway
SZ
CTR
0.51
0.43
0.49
0.57
42 (0.258)
33 (0.185)
81 (0.497)
87 (0.489)
40 (0.245)
58 (0.326)
rs507460
Denmark
SZ
CTR
0.50
0.48
0.50
0.52
104 (0.248)
229 (0.228)
209 (0.499)
501 (0.499)
106 (0.253)
275 (0.274)
rs507460
Sweden
SZ
CTR
0.47
0.46
0.53
0.54
56 (0.218)
61 (0.210)
128 (0.498)
145 (0.498)
73 (0.284)
85 (0.292)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
A-Allele
T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
Caucasian
rs532383
Norway
SZ
CTR
0.06
0.08
0.94
0.92
1 (0.006)
1 (0.006)
18 (0.110)
25 (0.141)
145 (0.884)
151 (0.853)
rs532383
Denmark
SZ
CTR
0.07
0.08
0.93
0.92
2 (0.005)
6 (0.006)
55 (0.131)
140 (0.139)
362 (0.864)
858 (0.855)
rs532383
Sweden
SZ
CTR
0.08
0.07
0.92
0.93
2 (0.008)
2 (0.007)
38 (0.148)
39 (0.133)
217 (0.844)
252 (0.860)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs535620
Norway
SZ
CTR
0.31
0.34
0.69
0.66
15 (0.093)
20 (0.113)
69 (0.426)
79 (0.446)
78 (0.481)
78 (0.441)
rs535620
Denmark
SZ
CTR
0.40
0.33
0.60
0.67
66 (0.158)
112 (0.112)
201 (0.480)
447 (0.445)
152 (0.363)
445 (0.443)
rs535620
Sweden
SZ
CTR
0.34
0.32
0.66
0.68
29 (0.113)
30 (0.103)
115 (0.447)
127 (0.435)
113 (0.440)
135 (0.462)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
T-Allele
A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
Caucasian
rs539308
Norway
SZ
CTR
0.10
0.09
0.90
0.91
2 (0.012)
1 (0.006)
30 (0.184)
29 (0.165)
131 (0.804)
146 (0.830)
rs539308
Denmark
SZ
CTR
0.09
0.08
0.91
0.92
3 (0.007)
7 (0.007)
69 (0.165)
152 (0.151)
346 (0.828)
845 (0.842)
rs539308
Sweden
SZ
CTR
0.09
0.10
0.91
0.90
2 (0.008)
3 (0.010)
43 (0.167)
50 (0.171)
212 (0.825)
240 (0.819)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs575605
Norway
SZ
CTR
0.30
0.31
0.70
0.69
15 (0.092)
17 (0.096)
69 (0.423)
75 (0.424)
79 (0.485)
85 (0.480)
rs575605
Denmark
SZ
CTR
0.30
0.30
0.70
0.70
38 (0.091)
88 (0.088)
176 (0.420)
418 (0.416)
205 (0.489)
498 (0.496)
rs575605
Sweden
SZ
CTR
0.29
0.32
0.71
0.68
22 (0.086)
29 (0.099)
106 (0.412)
126 (0.432)
129 (0.502)
137 (0.469)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs6656317
Norway
SZ
CTR
0.17
0.19
0.83
0.81
5 (0.030)
7 (0.040)
47 (0.287)
55 (0.311)
112 (0.683)
115 (0.650)
rs6656317
Denmark
SZ
CTR
0.20
0.18
0.80
0.82
17 (0.041)
32 (0.032)
136 (0.325)
295 (0.294)
266 (0.635)
677 (0.674)
rs6656317
Sweden
SZ
CTR
0.20
0.17
0.80
0.83
11 (0.043)
9 (0.031)
83 (0.322)
83 (0.283)
164 (0.636)
201 (0.686)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs6671364
Norway
SZ
CTR
0.10
0.11
0.90
0.89
2 (0.012)
2 (0.011)
30 (0.184)
35 (0.198)
131 (0.804)
140 (0.791)
rs6671364
Denmark
SZ
CTR
0.08
0.10
0.92
0.90
3 (0.007)
11 (0.011)
65 (0.155)
187 (0.186)
351 (0.838)
806 (0.803)
rs6671364
Sweden
SZ
CTR
0.06
0.13
0.94
0.87
1 (0.004)
5 (0.017)
30 (0.117)
68 (0.233)
226 (0.879)
219 (0.750)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs7517274
Norway
SZ
CTR
0.37
0.32
0.63
0.68
23 (0.141)
18 (0.101)
76 (0.466)
77 (0.433)
64 (0.393)
83 (0.466)
rs7517274
Denmark
SZ
CTR
0.33
0.34
0.67
0.66
46 (0.110)
119 (0.119)
185 (0.442)
454 (0.452)
188 (0.449)
431 (0.429)
rs7517274
Sweden
SZ
CTR
0.35
0.34
0.65
0.66
32 (0.125)
35 (0.119)
117 (0.455)
132 (0.451)
108 (0.420)
126 (0.430)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs904896
Norway
SZ
CTR
0.29
0.26
0.71
0.74
14 (0.085)
12 (0.068)
67 (0.409)
69 (0.390)
83 (0.506)
96 (0.542)
rs904896
Denmark
SZ
CTR
0.27
0.26
0.73
0.74
30 (0.072)
69 (0.069)
165 (0.395)
388 (0.386)
223 (0.533)
548 (0.545)
rs904896
Sweden
SZ
CTR
0.25
0.27
0.75
0.73
16 (0.062)
21 (0.072)
97 (0.377)
115 (0.394)
144 (0.560)
156 (0.534)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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