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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Puri, 2008
 Gene: UHMK1  (KIS; Kist)  Entrez Gene
 Protein: kinase interacting stathmin  (KIS protein kinase; kinase interacting with leukemia-associated gene (stathmin))  ProteinLink
 Chromosome: 1   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 22 October 2010
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 7

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs10494370 UK (Scotland) SZ
CTR
0.09
0.10
0.91
0.90
7 (0.009)
6 (0.011)
134 (0.164)
103 (0.180)
677 (0.828)
462 (0.809)
rs10494370 Overlaps with Puri, 2006 SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs7513662 Overlaps with Puri, 2006 SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs7513662 UK (Scotland) SZ
CTR
0.32
0.37
0.68
0.63
83 (0.102)
78 (0.136)
355 (0.436)
267 (0.467)
377 (0.463)
227 (0.397)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs423227 UK (Scotland) SZ
CTR
0.13
0.13
0.87
0.87
14 (0.017)
9 (0.016)
184 (0.226)
127 (0.227)
617 (0.757)
424 (0.757)
rs423227 Overlaps with Puri, 2006 SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs6427680 Overlaps with Puri, 2006 SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs6427680 UK (Scotland) SZ
CTR
0.45
0.48
0.55
0.52
163 (0.203)
133 (0.231)
397 (0.494)
288 (0.499)
243 (0.303)
156 (0.270)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele C-Allele A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian
rs6694863 UK (Scotland) SZ
CTR
0.05
0.06
0.95
0.94
2 (0.002)
2 (0.003)
80 (0.096)
65 (0.113)
755 (0.902)
507 (0.883)
rs6694863 Overlaps with Puri, 2006 SZ
CTR
0.05
0.08
0.95
0.92
1 (0.002)
3 (0.006)
43 (0.094)
69 (0.147)
412 (0.904)
398 (0.847)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs10753578 Overlaps with Puri, 2006 SZ
CTR
0.22
0.18
0.78
0.82
22 (0.049)
14 (0.032)
155 (0.343)
131 (0.296)
275 (0.608)
298 (0.673)
rs10753578 UK (Scotland) SZ
CTR
0.20
0.23
0.80
0.77
33 (0.040)
31 (0.054)
267 (0.320)
205 (0.354)
534 (0.640)
343 (0.592)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs6704428 UK (Scotland) SZ
CTR
0.07
0.08
0.93
0.92
4 (0.005)
4 (0.007)
108 (0.130)
84 (0.147)
720 (0.865)
484 (0.846)
rs6704428 Overlaps with Puri, 2006 SZ
CTR
0.08
0.06
0.92
0.94
3 (0.007)
2 (0.004)
67 (0.148)
51 (0.113)
383 (0.845)
399 (0.883)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
ALSGene
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An up-to-date collection of all published genetic association studies.
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