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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Lo, 2006
 Gene: GABRB2   Entrez Gene
 Protein: gamma-aminobutyric acid (GABA) A receptor, beta 2   ProteinLink
 Chromosome: 5   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 22 October 2010
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 17

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs1816071 Japan SZ
CTR		 0.28
0.26		 0.72
0.74		 24 (0.079)
17 (0.082)		 125 (0.411)
75 (0.362)		 155 (0.510)
115 (0.556)
 Caucasian
rs1816071 Germany SZ
CTR		 0.36
0.43		 0.64
0.57		 53 (0.176)
35 (0.184)		 111 (0.369)
93 (0.489)		 137 (0.455)
62 (0.326)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs1816072 Japan SZ
CTR		 0.44
0.39		 0.56
0.61		 67 (0.220)
36 (0.174)		 135 (0.444)
89 (0.430)		 102 (0.336)
82 (0.396)
 Caucasian
rs1816072 Germany SZ
CTR		 0.36
0.43		 0.64
0.57		 53 (0.176)
35 (0.184)		 112 (0.372)
93 (0.489)		 136 (0.452)
62 (0.326)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs194072 Japan SZ
CTR		 0.16
0.17		 0.84
0.83		 9 (0.030)
7 (0.034)		 80 (0.263)
57 (0.275)		 215 (0.707)
143 (0.691)
 Caucasian
rs194072 Germany SZ
CTR		 0.13
0.15		 0.87
0.85		 7 (0.023)
6 (0.032)		 67 (0.223)
46 (0.242)		 227 (0.754)
138 (0.726)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele G-Allele C/C
(frequency)		 C/G
(frequency)		 G/G
(frequency)
 Asian
rs252944 Japan SZ
CTR		 0.16
0.17		 0.84
0.83		 10 (0.033)
7 (0.034)		 79 (0.260)
55 (0.266)		 215 (0.707)
145 (0.700)
 Caucasian
rs252944 Germany SZ
CTR		 0.13
0.15		 0.87
0.85		 7 (0.023)
6 (0.032)		 64 (0.213)
46 (0.242)		 230 (0.764)
138 (0.726)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele G-Allele T/T
(frequency)		 T/G
(frequency)		 G/G
(frequency)
 Asian
rs6556547 Japan SZ
CTR		 0.16
0.16		 0.84
0.84		 9 (0.030)
6 (0.029)		 78 (0.257)
54 (0.261)		 217 (0.714)
147 (0.710)
 Caucasian
rs6556547 Germany SZ
CTR		 0.05
0.08		 0.95
0.92		 1 (0.003)
2 (0.011)		 30 (0.100)
25 (0.132)		 270 (0.897)
163 (0.858)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs10060079 Japan SZ
CTR		 0.04
0.03		 0.96
0.97		 0 (0.000)
0 (0.000)		 26 (0.086)
12 (0.058)		 278 (0.914)
195 (0.942)
 Caucasian
rs10060079 Germany SZ
CTR		 0.07
0.08		 0.93
0.92		 7 (0.023)
3 (0.016)		 27 (0.090)
25 (0.132)		 267 (0.887)
162 (0.853)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs10060148 Japan SZ
CTR		 0.04
0.03		 0.96
0.97		 0 (0.000)
0 (0.000)		 26 (0.086)
12 (0.058)		 278 (0.914)
195 (0.942)
 Caucasian
rs10060148 Germany SZ
CTR		 0.05
0.08		 0.95
0.92		 1 (0.003)
3 (0.016)		 27 (0.090)
25 (0.132)		 273 (0.907)
162 (0.853)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele G-Allele C/C
(frequency)		 C/G
(frequency)		 G/G
(frequency)
 Asian
rs13178374 Japan SZ
CTR		 0.08
0.07		 0.92
0.93		 4 (0.013)
0 (0.000)		 39 (0.128)
27 (0.130)		 261 (0.859)
180 (0.870)
 Caucasian
rs13178374 Germany SZ
CTR		 0.03
0.04		 0.97
0.96		 1 (0.003)
0 (0.000)		 16 (0.053)
14 (0.074)		 284 (0.944)
176 (0.926)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs2546620 Germany SZ
CTR		 0.19
0.19		 0.81
0.81		 11 (0.037)
14 (0.074)		 90 (0.299)
44 (0.233)		 200 (0.664)
131 (0.693)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele C-Allele G/G
(frequency)		 G/C
(frequency)		 C/C
(frequency)
 Caucasian
rs2617505 Germany SZ
CTR		 0.18
0.19		 0.82
0.81		 11 (0.037)
14 (0.074)		 89 (0.296)
44 (0.233)		 201 (0.668)
131 (0.693)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs6891988 Japan SZ
CTR		 0.15
0.13		 0.85
0.87		 7 (0.023)
2 (0.010)		 79 (0.260)
48 (0.232)		 218 (0.717)
157 (0.758)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs35351365 (ss48400072) Japan SZ
CTR		 0.16
0.13		 0.84
0.87		 8 (0.026)
2 (0.010)		 79 (0.260)
48 (0.232)		 217 (0.714)
157 (0.758)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs3482061 (ss48400073) Japan SZ
CTR		 0.04
0.03		 0.96
0.97		 0 (0.000)
0 (0.000)		 26 (0.085)
12 (0.058)		 279 (0.915)
195 (0.942)
 Caucasian
rs3482061 (ss48400073) Germany SZ
CTR		 0.06
0.08		 0.94
0.92		 1 (0.003)
2 (0.011)		 32 (0.106)
26 (0.137)		 268 (0.890)
162 (0.853)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs34820615 (ss48400074) Germany SZ
CTR		 0.03
0.03		 0.97
0.97		 0 (0.000)
0 (0.000)		 17 (0.056)
11 (0.058)		 284 (0.944)
179 (0.942)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs35858335 (ss48400075) Germany SZ
CTR		 0.02
0.03		 0.98
0.97		 0 (0.000)
0 (0.000)		 15 (0.050)
11 (0.058)		 286 (0.950)
179 (0.942)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs34941072 (ss48400076) Germany SZ
CTR		 0.02
0.03		 0.98
0.97		 0 (0.000)
0 (0.000)		 15 (0.050)
11 (0.058)		 286 (0.950)
179 (0.942)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele C-Allele A/A
(frequency)		 A/C
(frequency)		 C/C
(frequency)
 Caucasian
rs35595756 (ss48400077) Germany SZ
CTR		 0.02
0.03		 0.98
0.97		 0 (0.000)
0 (0.000)		 14 (0.047)
11 (0.058)		 287 (0.953)
179 (0.942)
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Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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