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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Deng, 2007
 Gene: SLC1A3  (EA6; EAAT1; GLAST; GLAST1)  Entrez Gene    View on MSGene
 Protein: solute carrier family 1 (glial high affinity glutamate transporter), member 3  (glutamate transporter variant EAAT1ex9skip)  ProteinLink
 Chromosome: 5   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 14 March 2007
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 11

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Asian
rs1428973 Japan SZ
CTR		 0.11
0.16		 0.90
0.85		 3 (0.030)
3 (0.030)		 15 (0.150)
25 (0.250)		 82 (0.820)
72 (0.720)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs2033267 Japan SZ
CTR		 0.33
0.39		 0.68
0.62		 9 (0.090)
16 (0.160)		 47 (0.470)
45 (0.450)		 44 (0.440)
39 (0.390)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs426040 Japan SZ
CTR		 0.29
0.26		 0.72
0.75		 6 (0.060)
4 (0.040)		 45 (0.450)
43 (0.430)		 49 (0.490)
53 (0.530)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs4869684 Japan SZ
CTR		 0.32
0.34		 0.69
0.66		 11 (0.110)
11 (0.110)		 41 (0.410)
46 (0.460)		 48 (0.480)
43 (0.430)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele C-Allele G/G
(frequency)		 G/C
(frequency)		 C/C
(frequency)
 Asian
rs1544795 Japan SZ
CTR		 0.30
0.35		 0.70
0.65		 9 (0.090)
9 (0.090)		 42 (0.420)
52 (0.520)		 49 (0.490)
39 (0.390)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Asian
rs3776585 Japan SZ
CTR		 0.33
0.41		 0.67
0.59		 13 (0.130)
18 (0.180)		 40 (0.400)
46 (0.460)		 47 (0.470)
36 (0.360)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Asian
rs962686 Japan SZ
CTR		 0.45
0.38		 0.55
0.63		 23 (0.230)
13 (0.130)		 44 (0.440)
49 (0.490)		 33 (0.330)
38 (0.380)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs2303716 Japan SZ
CTR		 0.24
0.30		 0.77
0.70		 5 (0.050)
11 (0.110)		 37 (0.370)
38 (0.380)		 58 (0.580)
51 (0.510)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Asian
rs3776586 Japan SZ
CTR		 0.25
0.28		 0.75
0.72		 6 (0.060)
7 (0.070)		 38 (0.380)
42 (0.420)		 56 (0.560)
51 (0.510)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs1049524 Japan SZ
CTR		 0.42
0.39		 0.59
0.62		 15 (0.150)
16 (0.160)		 53 (0.530)
45 (0.450)		 32 (0.320)
39 (0.390)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Asian
rs1529461 Japan SZ
CTR		 0.25
0.25		 0.76
0.76		 4 (0.040)
6 (0.060)		 41 (0.410)
37 (0.370)		 55 (0.550)
57 (0.570)
SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
ALSGene
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An up-to-date collection of all published genetic association studies.
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