Home
Your Profile
Become a Member/Get Newsletter
Contact Us
Recent Updates
Current Papers
Search All Papers
Search Comments
Research News
Current Hypotheses
Idea Lab
Online Discussions
Virtual Conferences
Interviews
Tech Corner
What We Know
SchizophreniaGene
Animal Models
Drugs in Trials
Research Tools
Grants
Jobs
Conferences
Journals
Community Calendar
General Information
Member Directory
Researcher Profiles
Institutes and Labs
Mission
History
SRF Team
Advisory Board
Support Us
How to Cite
Fan (E)Mail
The Schizophrenia Research Forum web site is sponsored by
NARSAD
, the Brain and Behavior Research Fund, and was created with funding from the
U.S. National Institute of Mental Health
.
Printable version
Polymorphism Details
Study:
Shi, 2004
Gene:
SLIT3
(MEGF5; SLIL2; SLIT1; Slit-3)
View on PDGene
Protein:
slit homolog 3
Chromosome:
5
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 14 March 2007
Total number of polymorphisms investigated by this study: 65
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
T-Allele
A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
Asian
SLIT3_6764
China
SZ
CTR
0.27
0.24
0.73
0.76
29 (0.076)
23 (0.060)
153 (0.398)
142 (0.370)
202 (0.526)
219 (0.570)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
A-Allele
T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
Asian
SLIT3_36223
China
SZ
CTR
0.22
0.20
0.78
0.80
19 (0.049)
16 (0.042)
134 (0.349)
124 (0.323)
231 (0.602)
244 (0.635)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Asian
SLIT3_36404
China
SZ
CTR
0.23
0.23
0.77
0.77
20 (0.052)
21 (0.056)
134 (0.349)
129 (0.345)
230 (0.599)
224 (0.599)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
SLIT3_36435
China
SZ
CTR
0.22
0.23
0.78
0.77
19 (0.049)
20 (0.052)
134 (0.349)
136 (0.355)
231 (0.602)
227 (0.593)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
SLIT3_36484
China
SZ
CTR
0.23
0.19
0.77
0.81
20 (0.052)
2 (0.005)
135 (0.351)
136 (0.373)
230 (0.597)
227 (0.622)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_52046
China
SZ
CTR
0.17
0.18
0.83
0.82
11 (0.029)
13 (0.034)
106 (0.276)
114 (0.296)
267 (0.695)
258 (0.670)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Asian
SLIT3_66328
China
SZ
CTR
0.13
0.13
0.87
0.87
6 (0.016)
7 (0.018)
85 (0.221)
88 (0.229)
293 (0.763)
289 (0.753)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_66450
China
SZ
CTR
0.15
0.17
0.85
0.83
8 (0.021)
11 (0.029)
96 (0.250)
109 (0.284)
280 (0.729)
264 (0.688)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Asian
SLIT3_72532
China
SZ
CTR
0.26
0.23
0.74
0.77
27 (0.070)
21 (0.055)
149 (0.388)
137 (0.357)
208 (0.542)
226 (0.589)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
C-Allele
G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
Asian
SLIT3_81526
China
SZ
CTR
0.18
0.22
0.82
0.78
12 (0.031)
18 (0.047)
112 (0.292)
130 (0.339)
259 (0.676)
236 (0.615)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
C-Allele
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
Asian
SLIT3_86236
China
SZ
CTR
0.38
0.36
0.62
0.64
57 (0.148)
49 (0.128)
182 (0.473)
176 (0.458)
146 (0.379)
159 (0.414)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Asian
SLIT3_96043
China
SZ
CTR
0.07
0.10
0.93
0.90
2 (0.005)
4 (0.010)
52 (0.135)
67 (0.174)
330 (0.859)
313 (0.815)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Asian
SLIT3_101798
China
SZ
CTR
0.40
0.40
0.60
0.60
61 (0.159)
62 (0.161)
184 (0.480)
185 (0.482)
138 (0.360)
137 (0.357)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
G-Allele
C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
Asian
SLIT3_120246
China
SZ
CTR
0.48
0.44
0.52
0.56
90 (0.234)
73 (0.190)
192 (0.500)
189 (0.491)
102 (0.266)
123 (0.319)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_120369
China
SZ
CTR
0.44
0.44
0.56
0.56
73 (0.190)
76 (0.197)
189 (0.491)
190 (0.494)
123 (0.319)
119 (0.309)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
A-Allele
T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
Asian
SLIT3_125439
China
SZ
CTR
0.10
0.09
0.90
0.91
4 (0.010)
3 (0.008)
68 (0.177)
62 (0.161)
312 (0.813)
320 (0.831)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_134818
China
SZ
CTR
0.49
0.47
0.51
0.53
94 (0.245)
86 (0.224)
192 (0.500)
191 (0.497)
98 (0.255)
107 (0.279)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Asian
SLIT3_162512
China
SZ
CTR
0.40
0.42
0.60
0.58
62 (0.161)
68 (0.177)
184 (0.479)
187 (0.487)
138 (0.359)
129 (0.336)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
T-Allele
A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
Asian
SLIT3_162578
China
SZ
CTR
0.05
0.04
0.95
0.96
1 (0.003)
1 (0.003)
33 (0.086)
31 (0.081)
350 (0.911)
352 (0.917)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
SLIT3_167160
China
SZ
CTR
0.17
0.19
0.83
0.81
11 (0.029)
13 (0.034)
106 (0.276)
117 (0.305)
267 (0.695)
254 (0.661)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_173721
China
SZ
CTR
0.15
0.14
0.85
0.86
8 (0.021)
8 (0.021)
96 (0.250)
95 (0.248)
280 (0.729)
280 (0.731)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
SLIT3_183334
China
SZ
CTR
0.33
0.32
0.67
0.68
43 (0.112)
40 (0.104)
171 (0.444)
168 (0.439)
171 (0.444)
175 (0.457)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
SLIT3_186405
China
SZ
CTR
0.39
0.38
0.61
0.62
57 (0.148)
55 (0.143)
182 (0.474)
181 (0.471)
145 (0.378)
148 (0.385)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
C-Allele
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
Asian
SLIT3_193131
China
SZ
CTR
0.18
0.20
0.82
0.80
12 (0.031)
15 (0.039)
113 (0.294)
122 (0.319)
259 (0.674)
246 (0.642)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Asian
SLIT3_210396
China
SZ
CTR
0.43
0.44
0.57
0.56
72 (0.188)
73 (0.190)
188 (0.490)
189 (0.491)
124 (0.323)
123 (0.319)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
C-Allele
G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
Asian
SLIT3_221829
China
SZ
CTR
0.36
0.38
0.64
0.63
49 (0.128)
54 (0.141)
176 (0.458)
180 (0.469)
159 (0.414)
150 (0.391)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_239959
China
SZ
CTR
0.24
0.24
0.76
0.76
23 (0.060)
23 (0.060)
142 (0.370)
142 (0.370)
219 (0.570)
219 (0.570)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_243140
China
SZ
CTR
0.36
0.38
0.64
0.62
49 (0.128)
55 (0.143)
176 (0.458)
181 (0.471)
159 (0.414)
148 (0.385)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_246101
China
SZ
CTR
0.09
0.10
0.91
0.90
3 (0.008)
4 (0.010)
62 (0.161)
68 (0.177)
319 (0.831)
312 (0.813)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
C-Allele
G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
Asian
SLIT3_270946
China
SZ
CTR
0.35
0.35
0.65
0.65
46 (0.120)
48 (0.125)
174 (0.454)
175 (0.456)
163 (0.426)
161 (0.419)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_276365
China
SZ
CTR
0.10
0.10
0.90
0.90
4 (0.009)
4 (0.010)
82 (0.177)
68 (0.177)
378 (0.815)
312 (0.813)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_287881
China
SZ
CTR
0.40
0.42
0.60
0.58
62 (0.161)
68 (0.177)
185 (0.482)
187 (0.487)
137 (0.357)
129 (0.336)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
A-Allele
T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
Asian
SLIT3_299022
China
SZ
CTR
0.37
0.35
0.63
0.65
52 (0.135)
47 (0.122)
179 (0.466)
175 (0.456)
153 (0.398)
162 (0.422)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_299258
China
SZ
CTR
0.42
0.40
0.58
0.60
68 (0.177)
62 (0.161)
187 (0.487)
185 (0.482)
129 (0.336)
137 (0.357)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_307625
China
SZ
CTR
0.43
0.47
0.57
0.53
71 (0.185)
84 (0.219)
188 (0.490)
191 (0.497)
125 (0.326)
109 (0.284)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_315833
China
SZ
CTR
0.19
0.17
0.81
0.83
13 (0.034)
11 (0.029)
117 (0.305)
107 (0.279)
254 (0.661)
266 (0.693)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_324417
China
SZ
CTR
0.14
0.12
0.86
0.88
7 (0.018)
5 (0.013)
92 (0.240)
80 (0.208)
285 (0.742)
299 (0.779)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_342318
China
SZ
CTR
0.41
0.41
0.59
0.59
63 (0.164)
65 (0.169)
185 (0.483)
186 (0.484)
135 (0.352)
133 (0.346)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Asian
SLIT3_401168
China
SZ
CTR
0.03
0.03
0.97
0.97
0 (0.000)
0 (0.000)
25 (0.065)
22 (0.057)
359 (0.935)
362 (0.943)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
SLIT3_401371
China
SZ
CTR
0.17
0.18
0.83
0.82
11 (0.029)
12 (0.031)
107 (0.279)
113 (0.294)
266 (0.693)
259 (0.674)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
SLIT3_406798
China
SZ
CTR
0.44
0.42
0.56
0.58
73 (0.190)
67 (0.174)
189 (0.492)
187 (0.487)
122 (0.318)
130 (0.339)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Asian
SLIT3_430686
China
SZ
CTR
0.23
0.26
0.77
0.74
21 (0.055)
26 (0.068)
137 (0.357)
148 (0.385)
226 (0.589)
210 (0.547)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
A-Allele
T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
Asian
SLIT3_430701
China
SZ
CTR
0.24
0.25
0.76
0.75
23 (0.060)
24 (0.063)
142 (0.370)
144 (0.375)
219 (0.570)
216 (0.563)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
T-Allele
A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
Asian
SLIT3_436727
China
SZ
CTR
0.26
0.34
0.74
0.66
25 (0.065)
44 (0.115)
147 (0.383)
172 (0.448)
212 (0.552)
168 (0.438)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_460926
China
SZ
CTR
0.34
0.33
0.66
0.67
44 (0.115)
42 (0.109)
172 (0.448)
170 (0.443)
168 (0.438)
172 (0.448)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
G-Allele
C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
Asian
SLIT3_461005
China
SZ
CTR
0.48
0.50
0.52
0.50
88 (0.229)
95 (0.247)
192 (0.499)
192 (0.500)
105 (0.273)
97 (0.253)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
C-Allele
G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
Asian
SLIT3_467101
China
SZ
CTR
0.16
0.17
0.84
0.83
10 (0.026)
12 (0.031)
106 (0.276)
110 (0.286)
268 (0.698)
263 (0.683)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
C-Allele
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
Asian
SLIT3_473083
China
SZ
CTR
0.40
0.36
0.60
0.64
61 (0.159)
49 (0.128)
184 (0.479)
176 (0.458)
139 (0.362)
159 (0.414)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
SLIT3_474953
China
SZ
CTR
0.27
0.29
0.73
0.71
28 (0.073)
32 (0.084)
151 (0.393)
158 (0.413)
205 (0.534)
193 (0.504)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_489238
China
SZ
CTR
0.34
0.29
0.66
0.71
44 (0.115)
33 (0.086)
172 (0.449)
159 (0.413)
167 (0.436)
193 (0.501)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_500310
China
SZ
CTR
0.16
0.17
0.84
0.83
10 (0.026)
12 (0.031)
104 (0.271)
110 (0.286)
270 (0.703)
262 (0.682)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
G-Allele
C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
Asian
SLIT3_511718
China
SZ
CTR
0.37
0.37
0.63
0.63
52 (0.135)
53 (0.138)
178 (0.464)
179 (0.467)
154 (0.401)
151 (0.394)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_518592
China
SZ
CTR
0.36
0.35
0.64
0.65
49 (0.128)
47 (0.122)
176 (0.458)
175 (0.456)
159 (0.414)
162 (0.422)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Asian
SLIT3_526341
China
SZ
CTR
0.03
0.04
0.97
0.96
0 (0.000)
1 (0.003)
24 (0.063)
28 (0.073)
360 (0.938)
356 (0.925)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
SLIT3_527352
China
SZ
CTR
0.04
0.05
0.96
0.95
0 (0.000)
1 (0.003)
27 (0.070)
37 (0.096)
357 (0.930)
346 (0.901)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_528337
China
SZ
CTR
0.44
0.45
0.56
0.55
74 (0.193)
77 (0.201)
189 (0.492)
190 (0.495)
121 (0.315)
117 (0.305)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
SLIT3_528496
China
SZ
CTR
0.28
0.29
0.72
0.71
30 (0.078)
32 (0.083)
154 (0.401)
157 (0.409)
200 (0.521)
195 (0.508)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
SLIT3_531901
China
SZ
CTR
0.45
0.47
0.55
0.53
78 (0.203)
86 (0.225)
190 (0.495)
191 (0.499)
116 (0.302)
106 (0.277)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
C-Allele
G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
Asian
SLIT3_543873
China
SZ
CTR
0.10
0.12
0.90
0.88
4 (0.010)
5 (0.013)
72 (0.188)
79 (0.206)
308 (0.802)
300 (0.781)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
SLIT3_558004
China
SZ
CTR
0.35
0.36
0.65
0.64
48 (0.125)
49 (0.128)
176 (0.458)
176 (0.458)
160 (0.417)
159 (0.414)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
SLIT3_569084
China
SZ
CTR
0.08
0.10
0.92
0.90
2 (0.005)
4 (0.010)
55 (0.143)
69 (0.180)
327 (0.852)
311 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
SLIT3_583658
China
SZ
CTR
0.30
0.24
0.70
0.76
34 (0.088)
23 (0.060)
160 (0.416)
142 (0.370)
191 (0.496)
219 (0.570)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
G-Allele
C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
Asian
SLIT3_606965
China
SZ
CTR
0.35
0.37
0.65
0.63
46 (0.120)
53 (0.138)
174 (0.453)
179 (0.466)
164 (0.427)
152 (0.396)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
SLIT3_608740
China
SZ
CTR
0.37
0.32
0.63
0.68
53 (0.138)
39 (0.102)
179 (0.466)
167 (0.435)
152 (0.396)
178 (0.464)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
SLIT3_613453
China
SZ
CTR
0.34
0.36
0.66
0.64
44 (0.115)
50 (0.130)
172 (0.448)
177 (0.461)
168 (0.438)
157 (0.409)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
ALSGene
AlzGene
MSGene
PDGene
SZGene
An up-to-date collection of all published genetic association studies.
SRF News
SRF Comments
Text Size
Reset Text Size
Email this page
Research Participants
Collaborators
Copyright © 2005-2024 Schizophrenia Research Forum
Privacy Policy
Disclaimer
Disclosure
Copyright