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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Martorell, 2007
 Gene: ESR1  (ER; ESR; Era; ESRA; NR3A1)  Entrez Gene    View on AlzGene   View on MSGene   View on PDGene
 Protein: estrogen receptor 1  (oestrogen receptor; steroid hormone receptor)  ProteinLink
 Chromosome: 6   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 9 August 2010
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 23

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele T-Allele G/G
(frequency)		 G/T
(frequency)		 T/T
(frequency)
 Caucasian
rs2881766 Spain SZ
CTR		 0.18
0.20		 0.82
0.80		 18 (0.031)
24 (0.039)		 170 (0.291)
195 (0.317)		 396 (0.678)
396 (0.644)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs488133 Spain SZ
CTR		 0.37
0.32		 0.63
0.68		 80 (0.137)
63 (0.102)		 272 (0.465)
268 (0.436)		 233 (0.398)
284 (0.462)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele T-Allele G/G
(frequency)		 G/T
(frequency)		 T/T
(frequency)
 Caucasian
rs2071454 Spain SZ
CTR		 0.09
0.12		 0.91
0.88		 5 (0.009)
8 (0.013)		 95 (0.162)
127 (0.207)		 486 (0.829)
480 (0.780)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs2077647 Spain SZ
CTR		 0.43
0.47		 0.57
0.53		 110 (0.188)
134 (0.218)		 287 (0.491)
306 (0.498)		 187 (0.320)
175 (0.285)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs827421 Spain SZ
CTR		 0.45
0.48		 0.55
0.52		 116 (0.198)
142 (0.231)		 289 (0.494)
307 (0.499)		 180 (0.308)
166 (0.270)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs7774230 Spain SZ
CTR		 0.42
0.46		 0.58
0.54		 104 (0.178)
131 (0.213)		 285 (0.487)
306 (0.497)		 196 (0.335)
179 (0.291)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele G-Allele C/C
(frequency)		 C/G
(frequency)		 G/G
(frequency)
 Caucasian
rs7739085 Spain SZ
CTR		 0.42
0.46		 0.58
0.54		 105 (0.179)
129 (0.210)		 286 (0.488)
305 (0.496)		 195 (0.333)
181 (0.294)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele T-Allele G/G
(frequency)		 G/T
(frequency)		 T/T
(frequency)
 Caucasian
rs827419 Spain SZ
CTR		 0.38
0.36		 0.62
0.64		 84 (0.144)
80 (0.130)		 275 (0.470)
284 (0.462)		 226 (0.386)
251 (0.408)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Caucasian
rs1514348 Spain SZ
CTR		 0.43
0.42		 0.57
0.58		 106 (0.181)
106 (0.172)		 286 (0.489)
299 (0.486)		 193 (0.330)
210 (0.341)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs1514347 Spain SZ
CTR		 0.20
0.18		 0.80
0.82		 23 (0.039)
21 (0.034)		 187 (0.320)
185 (0.301)		 374 (0.640)
408 (0.664)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele C-Allele G/G
(frequency)		 G/C
(frequency)		 C/C
(frequency)
 Caucasian
rs1801132 Spain SZ
CTR		 0.19
0.19		 0.81
0.81		 21 (0.036)
23 (0.037)		 181 (0.309)
191 (0.310)		 383 (0.655)
402 (0.653)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs1884049 Spain SZ
CTR		 0.15
0.15		 0.85
0.85		 13 (0.022)
14 (0.023)		 150 (0.256)
159 (0.259)		 422 (0.721)
442 (0.719)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs932479 Spain SZ
CTR		 0.14
0.14		 0.86
0.86		 11 (0.019)
11 (0.018)		 137 (0.234)
145 (0.236)		 438 (0.747)
459 (0.746)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele G-Allele T/T
(frequency)		 T/G
(frequency)		 G/G
(frequency)
 Caucasian
rs932480 Spain SZ
CTR		 0.14
0.13		 0.86
0.87		 11 (0.019)
11 (0.018)		 137 (0.234)
144 (0.234)		 438 (0.747)
460 (0.748)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele C-Allele G/G
(frequency)		 G/C
(frequency)		 C/C
(frequency)
 Caucasian
rs1884052 Spain SZ
CTR		 0.10
0.11		 0.90
0.89		 6 (0.010)
8 (0.013)		 110 (0.188)
121 (0.197)		 469 (0.802)
486 (0.790)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs932477 Spain SZ
CTR		 0.08
0.08		 0.92
0.92		 4 (0.007)
4 (0.007)		 87 (0.149)
92 (0.150)		 494 (0.844)
519 (0.844)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs722208 Spain SZ
CTR		 0.24
0.25		 0.76
0.75		 35 (0.060)
39 (0.063)		 216 (0.369)
232 (0.377)		 334 (0.571)
344 (0.559)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs1569788 Spain SZ
CTR		 0.24
0.25		 0.76
0.75		 35 (0.060)
39 (0.063)		 216 (0.370)
232 (0.377)		 333 (0.570)
344 (0.559)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs926779 Spain SZ
CTR		 0.24
0.26		 0.76
0.74		 34 (0.058)
42 (0.068)		 215 (0.368)
238 (0.387)		 336 (0.574)
335 (0.545)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele T-Allele G/G
(frequency)		 G/T
(frequency)		 T/T
(frequency)
 Caucasian
rs3778085 Spain SZ
CTR		 0.10
0.12		 0.90
0.88		 6 (0.010)
9 (0.015)		 105 (0.179)
130 (0.211)		 474 (0.810)
476 (0.774)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs750686 Spain SZ
CTR		 0.30
0.32		 0.70
0.68		 54 (0.092)
61 (0.099)		 248 (0.424)
266 (0.433)		 283 (0.484)
288 (0.468)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs2228480 Spain SZ
CTR		 0.17
0.16		 0.83
0.84		 17 (0.029)
15 (0.024)		 166 (0.284)
161 (0.262)		 402 (0.687)
439 (0.714)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs3798577 Spain SZ
CTR		 0.43
0.43		 0.57
0.57		 106 (0.181)
115 (0.187)		 286 (0.489)
302 (0.491)		 193 (0.330)
198 (0.322)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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