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Polymorphism Details
Study:
Sanders, 2008
Gene:
TAAR6
(TA4; SCZD5; TRAR4)
Protein:
trace amine associated receptor 6
(trace amine receptor 4)
Chromosome:
6
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 22 October 2010
Total number of polymorphisms investigated by this study: 15
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs4305745
USA, Australia
SZ
CTR
0.47
0.47
0.53
0.53
410 (0.219)
440 (0.220)
931 (0.498)
997 (0.498)
529 (0.283)
564 (0.282)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs6903874
USA, Australia
SZ
CTR
0.18
0.20
0.82
0.80
62 (0.033)
76 (0.038)
557 (0.298)
629 (0.314)
1251 (0.669)
1297 (0.648)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs6937506
USA, Australia
SZ
CTR
0.18
0.20
0.82
0.80
63 (0.034)
76 (0.038)
559 (0.299)
629 (0.314)
1248 (0.667)
1297 (0.648)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs6907909
USA, Australia
SZ
CTR
0.32
0.34
0.68
0.66
189 (0.101)
225 (0.112)
811 (0.434)
892 (0.446)
870 (0.465)
885 (0.442)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Caucasian
rs7772821
USA, Australia
SZ
CTR
0.15
0.16
0.85
0.84
43 (0.023)
51 (0.025)
482 (0.258)
538 (0.269)
1345 (0.719)
1413 (0.706)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs8192624
USA, Australia
SZ
CTR
0.08
0.09
0.92
0.91
12 (0.006)
15 (0.007)
272 (0.145)
315 (0.157)
1586 (0.848)
1672 (0.835)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs8192625
USA, Australia
SZ
CTR
0.07
0.08
0.93
0.92
8 (0.004)
12 (0.006)
231 (0.124)
291 (0.145)
1631 (0.872)
1698 (0.849)
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
A-Allele
T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
Caucasian
rs1081075
USA, Australia
SZ
CTR
0.02
0.03
0.98
0.97
1 (0.001)
2 (0.001)
88 (0.047)
109 (0.054)
1781 (0.952)
1891 (0.945)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
G-Allele
C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
Caucasian
rs12189813
USA, Australia
SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-)
: Either no data provided, or data otherwise not eligible for inclusion (
see methods for details)
.
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Caucasian
rs17061449
USA, Australia
SZ
CTR
0.07
0.07
0.93
0.93
10 (0.005)
11 (0.005)
256 (0.137)
271 (0.135)
1603 (0.858)
1720 (0.859)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs41298393
USA, Australia
SZ
CTR
0.01
0.01
0.99
0.99
0 (0.000)
0 (0.000)
37 (0.020)
32 (0.016)
1833 (0.980)
1970 (0.984)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs41298395
USA, Australia
SZ
CTR
0.01
0.01
0.99
0.99
0 (0.000)
0 (0.000)
19 (0.010)
28 (0.014)
1851 (0.990)
1974 (0.986)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs41298397
USA, Australia
SZ
CTR
0.01
0.00
0.99
1.00
0 (0.000)
0 (0.000)
19 (0.010)
16 (0.008)
1851 (0.990)
1986 (0.992)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs9389007
USA, Australia
SZ
CTR
0.32
0.33
0.68
0.67
187 (0.100)
218 (0.109)
808 (0.432)
885 (0.442)
875 (0.468)
899 (0.449)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
C-Allele
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
Caucasian
rs9389008
USA, Australia
SZ
CTR
0.08
0.09
0.92
0.91
13 (0.007)
16 (0.008)
288 (0.154)
328 (0.164)
1569 (0.839)
1658 (0.828)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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An up-to-date collection of all published genetic association studies.
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