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Polymorphism Details
Study:
Ishiguro, 2008
Gene:
GNB1L
(GY2; FKSG1; WDR14; WDVCF; DGCRK3)
Protein:
guanine nucleotide binding protein beta-subunit-like polypeptide
(G-protein beta subunit-like protein)
Chromosome:
22
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 22 October 2010
Total number of polymorphisms investigated by this study: 13
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs5746832
Japan
SZ
CTR
0.48
0.50
0.52
0.50
430 (0.228)
476 (0.254)
958 (0.507)
916 (0.488)
501 (0.265)
484 (0.258)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Asian
rs5746834
Japan
SZ
CTR
0.07
0.07
0.93
0.93
12 (0.006)
12 (0.006)
234 (0.123)
228 (0.120)
1652 (0.870)
1653 (0.873)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
rs2269726
Japan
SZ
CTR
0.59
0.60
0.41
0.40
671 (0.352)
686 (0.360)
896 (0.470)
911 (0.478)
338 (0.177)
309 (0.162)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
G-Allele
C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
Asian
rs4819523
Japan
SZ
CTR
0.47
0.47
0.53
0.53
418 (0.222)
447 (0.236)
932 (0.494)
887 (0.468)
536 (0.284)
562 (0.296)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
C-Allele
G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
Asian
rs3788304
Japan
SZ
CTR
0.26
0.26
0.74
0.74
131 (0.069)
128 (0.067)
720 (0.378)
720 (0.378)
1056 (0.554)
1058 (0.555)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs10372
Japan
SZ
CTR
0.07
0.07
0.93
0.93
10 (0.005)
6 (0.003)
244 (0.128)
244 (0.128)
1648 (0.866)
1654 (0.869)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
rs11704083
Japan
SZ
CTR
0.41
0.41
0.59
0.59
334 (0.175)
320 (0.169)
915 (0.479)
931 (0.491)
660 (0.346)
646 (0.341)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs13057609
Japan
SZ
CTR
0.08
0.08
0.92
0.92
13 (0.007)
10 (0.005)
271 (0.144)
272 (0.144)
1604 (0.850)
1601 (0.850)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
rs2073765
Japan
SZ
CTR
0.20
0.20
0.80
0.80
90 (0.048)
76 (0.040)
586 (0.311)
590 (0.311)
1211 (0.642)
1229 (0.649)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
rs29807124
Japan
SZ
CTR
0.05
0.05
0.95
0.95
7 (0.004)
6 (0.003)
177 (0.095)
174 (0.093)
1688 (0.902)
1693 (0.904)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
rs5993835
Japan
SZ
CTR
0.12
0.11
0.88
0.89
33 (0.018)
22 (0.012)
374 (0.199)
365 (0.195)
1474 (0.784)
1484 (0.793)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
A-Allele
T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
Asian
rs7286924
Japan
SZ
CTR
0.35
0.35
0.65
0.65
236 (0.125)
226 (0.119)
848 (0.448)
872 (0.459)
808 (0.427)
800 (0.421)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
rs748806
Japan
SZ
CTR
0.47
0.48
0.53
0.52
432 (0.229)
458 (0.242)
919 (0.487)
911 (0.481)
537 (0.284)
526 (0.278)
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SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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