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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Roig, 2007
 Gene: DDR1  (CAK; DDR; NEP; PTK3; RTK6; TRKE; CD167; EDDR1; MCK10; NTRK4)  Entrez Gene
 Protein: discoidin domain receptor family, member 1  (cell adhesion kinase; mammarian carcinoma kinase 10; discoidin domain receptor DDR1d; neuroepithelial tyrosine kinase; PTK3A protein tyrosine kinase 3A; discoidin receptor tyrosine kinase; epithelial discoidin domain receptor 1; neurotrophic tyrosine kinase, receptor, type 4)  ProteinLink
 Chromosome: 6   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 9 January 2010
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 13

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele G-Allele T/T
(frequency)		 T/G
(frequency)		 G/G
(frequency)
 Caucasian
rs1264326 Spain SZ
CTR		 0.03
0.03		 0.97
0.97		 0 (0.000)
1 (0.002)		 26 (0.067)
40 (0.065)		 363 (0.933)
574 (0.933)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele G-Allele C/C
(frequency)		 C/G
(frequency)		 G/G
(frequency)
 Caucasian
rs2229933 Spain SZ
CTR		 0.19
0.15		 0.81
0.85		 14 (0.036)
14 (0.023)		 121 (0.311)
157 (0.255)		 254 (0.653)
444 (0.722)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs1049622 Spain SZ
CTR		 0.20
0.16		 0.80
0.84		 15 (0.039)
15 (0.024)		 123 (0.316)
162 (0.263)		 251 (0.645)
438 (0.712)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs1264320 Spain SZ
CTR		 0.35
0.37		 0.65
0.63		 48 (0.123)
84 (0.137)		 178 (0.458)
287 (0.467)		 163 (0.419)
244 (0.397)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs1264319 Spain SZ
CTR		 0.12
0.11		 0.88
0.89		 5 (0.013)
7 (0.011)		 81 (0.208)
116 (0.188)		 303 (0.779)
493 (0.800)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   m-Allele A-Allele m/m
(frequency)		 m/A
(frequency)		 A/A
(frequency)
 Caucasian
DDR1_novelSNP (Nr) Spain SZ
CTR		 0.02
0.02		 0.98
0.98		 0 (0.000)
0 (0.000)		 15 (0.039)
24 (0.039)		 374 (0.961)
591 (0.961)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs886422 Spain SZ
CTR		 0.04
0.04		 0.96
0.96		 1 (0.003)
1 (0.002)		 31 (0.080)
44 (0.072)		 357 (0.918)
570 (0.927)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs1049623 Spain SZ
CTR		 0.29
0.22		 0.71
0.78		 32 (0.082)
30 (0.049)		 160 (0.411)
212 (0.345)		 197 (0.506)
373 (0.607)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Caucasian
rs2267641 Spain SZ
CTR		 0.15
0.12		 0.85
0.88		 9 (0.023)
9 (0.015)		 99 (0.254)
129 (0.210)		 281 (0.722)
477 (0.776)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs2239518 Spain SZ
CTR		 0.15
0.13		 0.85
0.87		 9 (0.023)
10 (0.016)		 98 (0.252)
136 (0.221)		 282 (0.725)
469 (0.763)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs1049628 Spain SZ
CTR		 0.19
0.16		 0.81
0.84		 15 (0.038)
15 (0.024)		 122 (0.313)
163 (0.265)		 253 (0.649)
437 (0.711)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs1049633 Spain SZ
CTR		 0.03
0.03		 0.97
0.97		 0 (0.000)
1 (0.002)		 23 (0.059)
38 (0.062)		 365 (0.941)
576 (0.937)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs8408 Spain SZ
CTR		 0.19
0.16		 0.81
0.84		 15 (0.038)
15 (0.024)		 122 (0.313)
162 (0.263)		 253 (0.649)
438 (0.712)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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