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Polymorphism Details
Study:
Jungerius, 2007
Gene:
INPP4B
Protein:
inositol polyphosphate-4-phosphatase, type II, 105kD
(inositol polyphosphate 4-phosphatase II; 4-phosphatase II)
Chromosome:
4
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 13 February 2008
Total number of polymorphisms investigated by this study: 12
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs336356
Netherlands
SZ
CTR
0.06
0.03
0.94
0.97
1 (0.003)
1 (0.002)
34 (0.110)
34 (0.066)
275 (0.887)
484 (0.933)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs1497386
Netherlands
SZ
CTR
0.23
0.26
0.77
0.74
16 (0.052)
36 (0.069)
108 (0.348)
201 (0.387)
186 (0.600)
283 (0.544)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs6812034
Netherlands
SZ
CTR
0.10
0.11
0.90
0.89
3 (0.010)
6 (0.012)
54 (0.174)
102 (0.196)
253 (0.816)
412 (0.792)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs1817971
Netherlands
SZ
CTR
0.38
0.40
0.62
0.60
45 (0.146)
84 (0.162)
146 (0.472)
250 (0.481)
118 (0.382)
186 (0.358)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs1948323
Netherlands
SZ
CTR
0.17
0.15
0.83
0.85
9 (0.029)
12 (0.023)
87 (0.280)
136 (0.262)
215 (0.691)
371 (0.715)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
C-Allele
G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
Caucasian
rs3775693
Netherlands
SZ
CTR
0.13
0.14
0.87
0.86
5 (0.016)
10 (0.019)
71 (0.230)
126 (0.243)
233 (0.754)
383 (0.738)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs2636638
Netherlands
SZ
CTR
0.37
0.36
0.63
0.64
42 (0.136)
67 (0.129)
144 (0.466)
239 (0.460)
123 (0.398)
214 (0.412)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
C-Allele
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
Caucasian
rs4956433
Netherlands
SZ
CTR
0.06
0.06
0.94
0.94
1 (0.003)
2 (0.004)
37 (0.120)
59 (0.114)
271 (0.877)
458 (0.882)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs3775628
Netherlands
SZ
CTR
0.25
0.24
0.75
0.76
19 (0.061)
30 (0.058)
115 (0.371)
190 (0.367)
176 (0.568)
298 (0.575)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs3775692
Netherlands
SZ
CTR
0.19
0.18
0.81
0.82
11 (0.036)
17 (0.033)
93 (0.302)
154 (0.298)
204 (0.662)
345 (0.669)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs2055212
Netherlands
SZ
CTR
0.16
0.16
0.84
0.84
8 (0.026)
13 (0.025)
83 (0.267)
137 (0.263)
220 (0.707)
371 (0.712)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs881611
Netherlands
SZ
CTR
0.37
0.37
0.63
0.63
42 (0.135)
70 (0.135)
144 (0.465)
241 (0.463)
124 (0.400)
209 (0.402)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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