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Polymorphism Details
Study:
Jungerius, 2007
Gene:
FGFR2
(BEK; JWS; CEK3; CFD1; ECT1; KGFR; TK14; TK25; BFR-1; CD332)
Protein:
fibroblast growth factor receptor 2
(FGF receptor; bacteria-expressed kinase; hydroxyaryl-protein kinase; keratinocyte growth factor receptor; BEK fibroblast growth factor receptor; protein tyrosine kinase, receptor like 14)
Chromosome:
10
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 13 February 2008
Total number of polymorphisms investigated by this study: 12
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs2981428
Netherlands
SZ
CTR
0.40
0.46
0.60
0.54
50 (0.161)
108 (0.208)
149 (0.479)
258 (0.497)
112 (0.360)
153 (0.295)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs2912787
Netherlands
SZ
CTR
0.20
0.16
0.80
0.84
12 (0.039)
13 (0.025)
99 (0.319)
140 (0.270)
199 (0.642)
366 (0.705)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs1613776
Netherlands
SZ
CTR
0.04
0.05
0.96
0.95
0 (0.000)
1 (0.002)
23 (0.074)
47 (0.091)
286 (0.926)
471 (0.908)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs3135758
Netherlands
SZ
CTR
0.09
0.08
0.91
0.92
2 (0.006)
3 (0.006)
50 (0.162)
76 (0.146)
257 (0.832)
441 (0.848)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs7085142
Netherlands
SZ
CTR
0.39
0.41
0.61
0.59
48 (0.155)
88 (0.169)
147 (0.476)
252 (0.484)
114 (0.369)
181 (0.347)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs1047057
Netherlands
SZ
CTR
0.44
0.46
0.56
0.54
60 (0.194)
108 (0.208)
153 (0.494)
258 (0.497)
97 (0.313)
153 (0.295)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs4752496
Netherlands
SZ
CTR
0.34
0.33
0.66
0.67
36 (0.116)
57 (0.109)
140 (0.452)
230 (0.441)
134 (0.432)
234 (0.449)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs1047100
Netherlands
SZ
CTR
0.25
0.25
0.75
0.75
20 (0.065)
32 (0.061)
118 (0.381)
193 (0.370)
172 (0.555)
296 (0.568)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs4412700
Netherlands
SZ
CTR
0.03
0.03
0.97
0.97
0 (0.000)
0 (0.000)
19 (0.061)
30 (0.058)
290 (0.939)
489 (0.942)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs2912779
Netherlands
SZ
CTR
0.40
0.40
0.60
0.60
50 (0.161)
81 (0.156)
149 (0.481)
248 (0.479)
111 (0.358)
189 (0.365)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Caucasian
rs7090018
Netherlands
SZ
CTR
0.26
0.27
0.74
0.73
21 (0.068)
37 (0.071)
120 (0.387)
203 (0.390)
169 (0.545)
281 (0.539)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs1649161
Netherlands
SZ
CTR
0.25
0.26
0.75
0.74
20 (0.065)
34 (0.066)
118 (0.381)
198 (0.382)
172 (0.555)
287 (0.553)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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