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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Christoforou, 2007
 Gene: 4p15-16_D2 
 Protein: unknown
 Chromosome: 4   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 31 October 2007 ;  ***This locus was identified via a large-scale fine-mapping (4p15-16) analysis and has not yet been assigned to a specific gene***
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 11

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs4697039 UK (Scotland) SZ
CTR
0.42
0.42
0.58
0.58
68 (0.176)
80 (0.174)
188 (0.487)
223 (0.486)
130 (0.337)
156 (0.340)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs1511436 UK (Scotland) SZ
CTR
0.15
0.14
0.85
0.86
8 (0.021)
9 (0.020)
96 (0.249)
109 (0.238)
282 (0.731)
340 (0.742)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele T-Allele G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
 Caucasian
rs907316 UK (Scotland) SZ
CTR
0.27
0.29
0.73
0.71
28 (0.073)
38 (0.083)
153 (0.396)
188 (0.410)
205 (0.531)
232 (0.507)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs1021400 UK (Scotland) SZ
CTR
0.13
0.13
0.87
0.87
7 (0.018)
8 (0.017)
88 (0.228)
104 (0.227)
291 (0.754)
347 (0.756)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs871409 UK (Scotland) SZ
CTR
0.36
0.35
0.64
0.65
50 (0.130)
57 (0.125)
178 (0.461)
209 (0.457)
158 (0.409)
191 (0.418)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs4697414 UK (Scotland) SZ
CTR
0.18
0.17
0.82
0.83
13 (0.034)
13 (0.028)
115 (0.298)
129 (0.282)
258 (0.668)
316 (0.690)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele A-Allele C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
 Caucasian
rs10517023 UK (Scotland) SZ
CTR
0.30
0.30
0.70
0.70
34 (0.088)
40 (0.087)
161 (0.418)
191 (0.417)
190 (0.494)
227 (0.496)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs4697415 UK (Scotland) SZ
CTR
0.36
0.39
0.64
0.61
50 (0.129)
68 (0.148)
178 (0.460)
217 (0.474)
159 (0.411)
173 (0.378)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs1491384 UK (Scotland) SZ
CTR
0.29
0.32
0.71
0.68
33 (0.085)
48 (0.105)
159 (0.412)
201 (0.439)
194 (0.503)
209 (0.456)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs1491380 UK (Scotland) SZ
CTR
0.37
0.36
0.63
0.64
54 (0.140)
58 (0.127)
181 (0.469)
210 (0.460)
151 (0.391)
189 (0.414)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs1159937 UK (Scotland) SZ
CTR
0.25
0.22
0.75
0.78
24 (0.062)
23 (0.050)
144 (0.373)
160 (0.349)
218 (0.565)
275 (0.600)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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