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Printable version
Polymorphism Details
Study:
Aleksic, 2010
Gene:
KREMEN1
(KRM1; KREMEN; KREMEM1; FLJ31863)
Protein:
kringle-containing transmembrane protein 1
(OTTHUMP00000028977; kringle-coding gene marking the eye and the nose)
Chromosome:
22
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 23 February 2010
Total number of polymorphisms investigated by this study: 11
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Asian
rs132277
Japan (I)
SZ
CTR
0.31
0.33
0.69
0.67
79 (0.095)
91 (0.107)
355 (0.427)
375 (0.441)
397 (0.478)
384 (0.452)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
A-Allele
T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
Asian
rs134603
Japan (I)
SZ
CTR
0.31
0.31
0.69
0.69
78 (0.094)
84 (0.099)
354 (0.426)
367 (0.432)
399 (0.480)
399 (0.469)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
rs134656
Japan (I)
SZ
CTR
0.33
0.34
0.67
0.66
92 (0.111)
99 (0.116)
369 (0.444)
383 (0.451)
370 (0.445)
368 (0.433)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Asian
rs134672
Japan (I)
SZ
CTR
0.18
0.18
0.82
0.82
26 (0.031)
28 (0.033)
241 (0.290)
251 (0.295)
564 (0.679)
571 (0.672)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs134683
Japan (I)
SZ
CTR
0.23
0.24
0.77
0.76
46 (0.055)
51 (0.060)
298 (0.359)
314 (0.369)
487 (0.586)
485 (0.571)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs2301446
Japan (I)
SZ
CTR
0.11
0.10
0.89
0.90
10 (0.012)
8 (0.009)
159 (0.191)
150 (0.176)
662 (0.797)
692 (0.814)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs5752866
Japan (I)
SZ
CTR
0.47
0.45
0.53
0.55
187 (0.225)
174 (0.205)
415 (0.499)
422 (0.496)
229 (0.276)
254 (0.299)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs5762996
Japan (I)
SZ
CTR
0.47
0.45
0.53
0.55
181 (0.218)
173 (0.204)
414 (0.498)
421 (0.495)
236 (0.284)
256 (0.301)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs5763001
Japan (I)
SZ
CTR
0.13
0.12
0.87
0.88
14 (0.017)
12 (0.014)
188 (0.226)
178 (0.209)
629 (0.757)
660 (0.776)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs713526
Japan (I)
SZ
CTR
0.15
0.19
0.85
0.81
19 (0.023)
29 (0.034)
214 (0.258)
257 (0.302)
598 (0.720)
564 (0.664)
rs713526
Japan (II)
SZ
CTR
0.16
0.17
0.84
0.83
19 (0.024)
23 (0.030)
208 (0.262)
220 (0.285)
566 (0.714)
528 (0.685)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Asian
rs8135301
Japan (I)
SZ
CTR
0.11
0.11
0.89
0.89
10 (0.012)
11 (0.013)
160 (0.193)
169 (0.199)
661 (0.795)
670 (0.788)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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Genes: 1008
Polymorphisms: 8788
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