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Printable version  
Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Olsen, 2008
 Gene: MAPK14  (RK; p38; EXIP; Mxi2; CSBP1; CSBP2; CSPB1; PRKM14; PRKM15; SAPK2A)  Entrez Gene
 Protein: mitogen-activated protein kinase 14  (p38alpha Exip; p38 MAP kinase; MAP kinase Mxi2; Csaids binding protein; MAX-interacting protein 2; stress-activated protein kinase 2A; p38 mitogen activated protein kinase; cytokine suppressive anti-inflammatory drug binding protein)  ProteinLink
 Chromosome: 6   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 8 May 2008
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 40

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs12199654 Scandinavia SZ
CTR
0.05
0.04
0.95
0.96
2 (0.003)
2 (0.002)
73 (0.095)
98 (0.077)
690 (0.902)
1174 (0.922)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs12211012 Scandinavia SZ
CTR
0.05
0.04
0.95
0.96
2 (0.003)
2 (0.002)
73 (0.095)
98 (0.077)
690 (0.902)
1174 (0.922)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele T-Allele G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
 Caucasian
rs13196204 Scandinavia SZ
CTR
0.17
0.18
0.83
0.82
22 (0.029)
41 (0.032)
216 (0.282)
376 (0.295)
527 (0.689)
857 (0.673)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele T-Allele T/T
(frequency)
T/T
(frequency)
T/T
(frequency)
 Caucasian
rs16883819 Scandinavia SZ
CTR
0.12
0.11
0.88
0.89
11 (0.014)
15 (0.012)
162 (0.212)
249 (0.196)
592 (0.774)
1009 (0.793)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs16884650 Scandinavia SZ
CTR
0.04
0.04
0.96
0.96
1 (0.001)
2 (0.002)
59 (0.077)
98 (0.077)
705 (0.922)
1174 (0.922)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele C-Allele A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian
rs2145361 Scandinavia SZ
CTR
0.10
0.10
0.90
0.90
8 (0.010)
13 (0.010)
138 (0.180)
229 (0.180)
620 (0.809)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs2145362 Scandinavia SZ
CTR
0.11
0.10
0.89
0.90
9 (0.012)
13 (0.010)
150 (0.196)
229 (0.180)
606 (0.792)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs2237093 Scandinavia SZ
CTR
0.11
0.10
0.89
0.90
9 (0.012)
13 (0.010)
150 (0.196)
229 (0.180)
606 (0.792)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs2237094 Scandinavia SZ
CTR
0.08
0.07
0.92
0.93
5 (0.007)
6 (0.005)
113 (0.148)
166 (0.130)
647 (0.846)
1102 (0.865)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs2815805 Scandinavia SZ
CTR
0.01
0.02
0.99
0.98
0 (0.000)
1 (0.001)
15 (0.020)
50 (0.039)
750 (0.980)
1224 (0.960)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs3730327 Scandinavia SZ
CTR
0.12
0.11
0.88
0.89
11 (0.014)
15 (0.012)
162 (0.212)
249 (0.196)
592 (0.774)
1009 (0.793)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele T-Allele G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
 Caucasian
rs3804454 Scandinavia SZ
CTR
0.22
0.22
0.78
0.78
37 (0.048)
62 (0.049)
263 (0.344)
437 (0.343)
465 (0.608)
775 (0.608)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs664367 Scandinavia SZ
CTR
0.49
0.50
0.51
0.50
184 (0.241)
319 (0.250)
382 (0.499)
637 (0.500)
199 (0.260)
319 (0.250)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs6908372 Scandinavia SZ
CTR
0.01
0.02
0.99
0.98
0 (0.000)
1 (0.001)
15 (0.020)
50 (0.039)
750 (0.980)
1224 (0.960)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs6930333 Scandinavia SZ
CTR
0.12
0.11
0.88
0.89
11 (0.014)
15 (0.012)
162 (0.212)
249 (0.196)
592 (0.774)
1009 (0.793)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs6934216 Scandinavia SZ
CTR
0.12
0.11
0.88
0.89
11 (0.014)
15 (0.012)
162 (0.212)
249 (0.196)
592 (0.774)
1009 (0.793)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs707994 Scandinavia SZ
CTR
0.15
0.16
0.85
0.84
17 (0.022)
33 (0.026)
195 (0.255)
342 (0.268)
553 (0.723)
899 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele A-Allele C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
 Caucasian
rs7745082 Scandinavia SZ
CTR
0.13
0.12
0.87
0.88
13 (0.017)
18 (0.014)
173 (0.226)
269 (0.211)
579 (0.757)
987 (0.775)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs7761118 Scandinavia SZ
CTR
0.12
0.11
0.88
0.89
11 (0.014)
15 (0.012)
162 (0.212)
249 (0.196)
592 (0.774)
1009 (0.793)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele T-Allele G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
 Caucasian
rs851004 Scandinavia SZ
CTR
0.15
0.16
0.85
0.84
17 (0.022)
33 (0.026)
195 (0.255)
342 (0.268)
553 (0.723)
899 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs851006 Scandinavia SZ
CTR
0.25
0.27
0.75
0.73
48 (0.063)
93 (0.073)
287 (0.375)
502 (0.394)
430 (0.562)
679 (0.533)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs851007 Scandinavia SZ
CTR
0.49
0.50
0.51
0.50
184 (0.241)
319 (0.250)
382 (0.499)
637 (0.500)
199 (0.260)
319 (0.250)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele G-Allele T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
 Caucasian
rs851009 Scandinavia SZ
CTR
0.15
0.16
0.85
0.84
17 (0.022)
33 (0.026)
195 (0.255)
342 (0.268)
553 (0.723)
899 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs851010 Scandinavia SZ
CTR
0.49
0.50
0.51
0.50
184 (0.241)
319 (0.250)
382 (0.499)
637 (0.500)
199 (0.260)
319 (0.250)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs851011 Scandinavia SZ
CTR
0.15
0.16
0.85
0.84
17 (0.022)
33 (0.026)
195 (0.255)
342 (0.268)
553 (0.723)
899 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs851017 Scandinavia SZ
CTR
0.01
0.01
0.99
0.99
0 (0.000)
0 (0.000)
15 (0.020)
25 (0.020)
750 (0.980)
1249 (0.980)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs851019 Scandinavia SZ
CTR
0.49
0.50
0.51
0.50
184 (0.241)
319 (0.250)
382 (0.499)
637 (0.500)
199 (0.260)
319 (0.250)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs851020 Scandinavia SZ
CTR
0.49
0.50
0.51
0.50
184 (0.241)
319 (0.250)
382 (0.499)
637 (0.500)
199 (0.260)
319 (0.250)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs851021 Scandinavia SZ
CTR
0.15
0.16
0.85
0.84
17 (0.022)
33 (0.026)
195 (0.255)
342 (0.268)
553 (0.723)
899 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele C-Allele A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian
rs851022 Scandinavia SZ
CTR
0.15
0.16
0.85
0.84
17 (0.022)
33 (0.026)
195 (0.255)
342 (0.268)
553 (0.723)
899 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs851023 Scandinavia SZ
CTR
0.15
0.16
0.85
0.84
17 (0.022)
33 (0.026)
195 (0.255)
342 (0.268)
553 (0.723)
899 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs851024 Scandinavia SZ
CTR
0.49
0.50
0.51
0.50
184 (0.241)
319 (0.250)
382 (0.499)
637 (0.500)
199 (0.260)
319 (0.250)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs9348986 Scandinavia SZ
CTR
0.11
0.10
0.89
0.90
9 (0.012)
13 (0.010)
150 (0.196)
229 (0.180)
606 (0.792)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs9357207 Scandinavia SZ
CTR
0.10
0.10
0.90
0.90
8 (0.010)
13 (0.010)
138 (0.180)
229 (0.180)
620 (0.809)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs9368898 Scandinavia SZ
CTR
0.11
0.10
0.89
0.90
9 (0.012)
13 (0.010)
150 (0.196)
229 (0.180)
606 (0.792)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs9368899 Scandinavia SZ
CTR
0.11
0.10
0.89
0.90
9 (0.012)
13 (0.010)
150 (0.196)
229 (0.180)
606 (0.792)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs9380546 Scandinavia SZ
CTR
0.10
0.10
0.90
0.90
8 (0.010)
13 (0.010)
138 (0.180)
229 (0.180)
620 (0.809)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele G-Allele T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
 Caucasian
rs9394328 Scandinavia SZ
CTR
0.10
0.10
0.90
0.90
8 (0.010)
13 (0.010)
138 (0.180)
229 (0.180)
620 (0.809)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs9462156 Scandinavia SZ
CTR
0.01
0.02
0.99
0.98
0 (0.000)
1 (0.001)
15 (0.020)
50 (0.039)
750 (0.980)
1224 (0.960)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs9470207 Scandinavia SZ
CTR
0.01
0.02
0.99
0.98
0 (0.000)
1 (0.001)
15 (0.020)
50 (0.039)
750 (0.980)
1224 (0.960)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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