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| Status: |
Updated 15 November 2010
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| Total number of polymorphisms investigated by this study: 13 |
| Case-Control Studies (by ethnic group) |
| |
Genotypes |
Polymorphism ID#
(Link to NCBI) |
Population |
|
G-Allele |
T-Allele |
G/G
(frequency) |
G/T
(frequency) |
T/T
(frequency) |
| Caucasian |
|
rs1344706
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
|
rs1344706
|
Overlaps with O'Donovan, 2008 (stage2) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
| Case-Control Studies (by ethnic group) |
| |
Genotypes |
Polymorphism ID#
(Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G
(frequency) |
G/C
(frequency) |
C/C
(frequency) |
| Caucasian |
|
rs12613195
|
Overlaps with O'Donovan, 2008 (stage2) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
|
rs12613195
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.27
0.34 |
0.73
0.66 |
35 (0.073)
167 (0.116) |
189 (0.395)
649 (0.449) |
255 (0.532)
629 (0.435) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes* |
Polymorphism ID#
(Link to NCBI) |
Population |
|
G-Allele |
T-Allele |
G/G
(frequency) |
G/T
(frequency) |
T/T
(frequency) |
| Caucasian |
|
rs3931790
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.15
0.21 |
0.85
0.79 |
11 (0.023)
64 (0.044) |
122 (0.255)
479 (0.331) |
346 (0.722)
902 (0.624) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes* |
Polymorphism ID#
(Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G
(frequency) |
G/A
(frequency) |
A/A
(frequency) |
| Caucasian |
|
rs4667001
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.45
0.41 |
0.55
0.59 |
97 (0.203)
243 (0.168) |
237 (0.495)
699 (0.484) |
145 (0.303)
503 (0.348) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes* |
Polymorphism ID#
(Link to NCBI) |
Population |
|
A-Allele |
T-Allele |
A/A
(frequency) |
A/T
(frequency) |
T/T
(frequency) |
| Caucasian |
|
rs12476147
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.41
0.37 |
0.59
0.63 |
81 (0.169)
198 (0.137) |
232 (0.483)
674 (0.466) |
167 (0.348)
574 (0.397) |
|
rs12476147
|
Overlaps with O'Donovan, 2008 (stage2) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes* |
Polymorphism ID#
(Link to NCBI) |
Population |
|
G-Allele |
T-Allele |
G/G
(frequency) |
G/T
(frequency) |
T/T
(frequency) |
| Caucasian |
|
rs1366842
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.45
0.41 |
0.55
0.59 |
97 (0.203)
243 (0.168) |
237 (0.495)
699 (0.484) |
145 (0.303)
503 (0.348) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes* |
Polymorphism ID#
(Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G
(frequency) |
G/A
(frequency) |
A/A
(frequency) |
| Caucasian |
|
rs1583048
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.15
0.21 |
0.85
0.79 |
11 (0.023)
64 (0.044) |
122 (0.255)
479 (0.331) |
346 (0.722)
902 (0.624) |
|
rs1583048
|
Overlaps with O'Donovan, 2008 (stage2) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes |
Polymorphism ID#
(Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G
(frequency) |
G/C
(frequency) |
C/C
(frequency) |
| Caucasian |
|
rs17584522
|
Overlaps with O'Donovan, 2008 (stage2) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
|
rs17584522
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.18
0.25 |
0.82
0.75 |
16 (0.033)
90 (0.062) |
141 (0.294)
542 (0.375) |
322 (0.672)
813 (0.563) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes* |
Polymorphism ID#
(Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C
(frequency) |
C/T
(frequency) |
T/T
(frequency) |
| Caucasian |
|
rs35676856
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.09
0.06 |
0.91
0.94 |
4 (0.008)
5 (0.003) |
78 (0.163)
163 (0.113) |
397 (0.829)
1277 (0.884) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes* |
Polymorphism ID#
(Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C
(frequency) |
C/G
(frequency) |
G/G
(frequency) |
| Caucasian |
|
rs3731834
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.15
0.17 |
0.85
0.83 |
11 (0.023)
42 (0.029) |
122 (0.255)
408 (0.282) |
346 (0.722)
995 (0.689) |
|
rs3731834
|
Overlaps with O'Donovan, 2008 (stage2) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes |
Polymorphism ID#
(Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G
(frequency) |
G/A
(frequency) |
A/A
(frequency) |
| Caucasian |
|
rs61739290
|
Overlaps with O'Donovan, 2008 (stage2) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
|
rs61739290
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.09
0.07 |
0.91
0.93 |
4 (0.008)
7 (0.005) |
78 (0.163)
188 (0.130) |
397 (0.829)
1250 (0.865) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes* |
Polymorphism ID#
(Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C
(frequency) |
C/G
(frequency) |
G/G
(frequency) |
| Caucasian |
|
rs6726421
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.45
0.41 |
0.55
0.59 |
97 (0.203)
243 (0.168) |
237 (0.495)
699 (0.484) |
145 (0.303)
503 (0.348) |
|
rs6726421
|
Overlaps with O'Donovan, 2008 (stage2) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
| Case-Control Studies (by ethnic group) |
| |
Genotypes |
Polymorphism ID#
(Link to NCBI) |
Population |
|
m-Allele |
M-Allele |
m/m
(frequency) |
m/M
(frequency) |
M/M
(frequency) |
| Caucasian |
| ss177930705
|
Overlaps with O'Donovan, 2008 (stage2) |
SZ
CTR |
-
- |
-
- |
0 (-)
0 (-) |
0 (-)
0 (-) |
0 (-)
0 (-) |
| ss177930705
|
Overlaps with O'Donovan, 2008 (stage1) |
SZ
CTR |
0.04
0.03 |
0.96
0.97 |
1 (0.002)
1 (0.001) |
37 (0.077)
84 (0.058) |
441 (0.921)
1360 (0.941) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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