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Polymorphism Details
Study:
Le Hellard, 2008
Gene:
SREBF1
(SREBP1; bHLHd1)
View on AlzGene
View on PDGene
Protein:
sterol regulatory element binding transcription factor 1
(sterol regulatory element binding protein-1)
Chromosome:
17
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 30 October 2008
Total number of polymorphisms investigated by this study: 10
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs3818717
Germany
SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-)
: Either no data provided, or data otherwise not eligible for inclusion (
see methods for details)
.
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs8068175
Germany
SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-)
: Either no data provided, or data otherwise not eligible for inclusion (
see methods for details)
.
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs17731766
Germany
SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-)
: Either no data provided, or data otherwise not eligible for inclusion (
see methods for details)
.
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs16960835
Germany
SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-)
: Either no data provided, or data otherwise not eligible for inclusion (
see methods for details)
.
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs9303144
Germany
SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-)
: Either no data provided, or data otherwise not eligible for inclusion (
see methods for details)
.
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs11654081
Germany
SZ
CTR
0.40
0.36
0.60
0.64
125 (0.160)
112 (0.133)
377 (0.482)
382 (0.455)
280 (0.358)
345 (0.411)
rs11654081
Norway
SZ
CTR
0.44
0.33
0.56
0.67
42 (0.222)
27 (0.131)
84 (0.444)
83 (0.403)
63 (0.333)
96 (0.466)
rs11654081
Denmark
SZ
CTR
0.34
0.35
0.66
0.65
58 (0.130)
124 (0.143)
184 (0.412)
358 (0.413)
205 (0.459)
384 (0.443)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs11868035
Denmark
SZ
CTR
0.27
0.27
0.73
0.73
37 (0.083)
74 (0.087)
169 (0.378)
322 (0.377)
241 (0.539)
459 (0.537)
rs11868035
Norway
SZ
CTR
0.39
0.27
0.61
0.73
28 (0.148)
19 (0.093)
91 (0.481)
74 (0.363)
70 (0.370)
111 (0.544)
rs11868035
Germany
SZ
CTR
0.33
0.29
0.67
0.71
78 (0.100)
70 (0.083)
361 (0.462)
354 (0.422)
343 (0.439)
415 (0.495)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs9907246
Germany
SZ
CTR
0.41
0.37
0.59
0.63
125 (0.160)
122 (0.145)
385 (0.492)
378 (0.451)
272 (0.348)
339 (0.404)
rs9907246
Norway
SZ
CTR
0.44
0.37
0.56
0.63
41 (0.216)
33 (0.159)
85 (0.447)
87 (0.420)
64 (0.337)
87 (0.420)
rs9907246
Denmark
SZ
CTR
0.35
0.35
0.65
0.65
51 (0.115)
115 (0.135)
204 (0.460)
373 (0.436)
188 (0.424)
367 (0.429)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs7503334
Denmark
SZ
CTR
0.36
0.37
0.64
0.63
59 (0.129)
124 (0.147)
215 (0.468)
374 (0.444)
185 (0.403)
344 (0.409)
rs7503334
Norway
SZ
CTR
0.46
0.38
0.54
0.62
42 (0.232)
33 (0.163)
82 (0.453)
86 (0.426)
57 (0.315)
83 (0.411)
rs7503334
Germany
SZ
CTR
0.42
0.39
0.58
0.61
135 (0.173)
132 (0.157)
388 (0.496)
384 (0.458)
259 (0.331)
323 (0.385)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs7222480
Germany
SZ
CTR
0.42
0.39
0.58
0.61
134 (0.171)
131 (0.156)
389 (0.497)
385 (0.459)
259 (0.331)
323 (0.385)
rs7222480
Norway
SZ
CTR
0.45
0.37
0.55
0.63
41 (0.223)
32 (0.159)
83 (0.451)
86 (0.428)
60 (0.326)
83 (0.413)
rs7222480
Denmark
SZ
CTR
0.37
0.37
0.63
0.63
59 (0.133)
121 (0.144)
215 (0.483)
373 (0.445)
171 (0.384)
344 (0.411)
SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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An up-to-date collection of all published genetic association studies.
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