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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Djurovic, 2009
 Gene: MCTP2  (FLJ11175; FLJ33303; MGC111402)  Entrez Gene
 Protein: multiple C2 domains, transmembrane 2  (multiple C2-domains with two transmembrane regions 2)  ProteinLink
 Chromosome: 15   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 20 April 2009
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 34

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs294544 Norway SZ
CTR
0.46
0.45
0.54
0.55
34 (0.209)
36 (0.203)
81 (0.497)
87 (0.492)
48 (0.294)
54 (0.305)
rs294544 Denmark SZ
CTR
0.44
0.43
0.56
0.57
81 (0.193)
186 (0.185)
207 (0.493)
493 (0.490)
132 (0.314)
327 (0.325)
rs294544 Sweden SZ
CTR
0.43
0.46
0.57
0.54
48 (0.187)
62 (0.212)
126 (0.490)
146 (0.498)
83 (0.323)
85 (0.290)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs294543 Sweden SZ
CTR
0.46
0.49
0.54
0.51
54 (0.210)
70 (0.239)
128 (0.498)
147 (0.502)
75 (0.292)
76 (0.259)
rs294543 Denmark SZ
CTR
0.49
0.47
0.51
0.53
101 (0.240)
222 (0.221)
210 (0.500)
501 (0.498)
109 (0.260)
283 (0.281)
rs294543 Norway SZ
CTR
0.50
0.49
0.50
0.51
41 (0.252)
42 (0.237)
81 (0.497)
89 (0.503)
41 (0.252)
46 (0.260)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs12899314 Norway SZ
CTR
0.25
0.20
0.75
0.80
10 (0.061)
7 (0.040)
61 (0.374)
57 (0.322)
92 (0.564)
113 (0.638)
rs12899314 Denmark SZ
CTR
0.24
0.23
0.76
0.77
24 (0.057)
53 (0.053)
153 (0.364)
356 (0.354)
243 (0.579)
597 (0.593)
rs12899314 Sweden SZ
CTR
0.23
0.22
0.77
0.78
14 (0.054)
14 (0.048)
91 (0.354)
101 (0.345)
152 (0.591)
178 (0.608)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele T-Allele A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
 Caucasian
rs294542 Sweden SZ
CTR
0.34
0.32
0.66
0.68
30 (0.117)
30 (0.102)
115 (0.447)
128 (0.437)
112 (0.436)
135 (0.461)
rs294542 Denmark SZ
CTR
0.32
0.34
0.68
0.66
43 (0.102)
116 (0.115)
183 (0.436)
452 (0.449)
194 (0.462)
438 (0.435)
rs294542 Norway SZ
CTR
0.31
0.33
0.69
0.67
16 (0.098)
19 (0.107)
70 (0.429)
78 (0.441)
77 (0.472)
80 (0.452)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs294560 Norway SZ
CTR
0.18
0.20
0.82
0.80
5 (0.031)
7 (0.040)
48 (0.294)
57 (0.322)
110 (0.675)
113 (0.638)
rs294560 Denmark SZ
CTR
0.20
0.21
0.80
0.79
17 (0.040)
44 (0.044)
134 (0.319)
334 (0.332)
269 (0.640)
628 (0.624)
rs294560 Sweden SZ
CTR
0.18
0.18
0.82
0.82
8 (0.031)
9 (0.031)
76 (0.296)
86 (0.294)
173 (0.673)
198 (0.676)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs294558 Sweden SZ
CTR
0.34
0.35
0.66
0.65
30 (0.117)
36 (0.123)
115 (0.447)
133 (0.454)
112 (0.436)
124 (0.423)
rs294558 Denmark SZ
CTR
0.38
0.35
0.62
0.65
61 (0.145)
123 (0.122)
198 (0.471)
458 (0.455)
161 (0.383)
425 (0.422)
rs294558 Norway SZ
CTR
0.38
0.35
0.62
0.65
24 (0.147)
22 (0.124)
76 (0.466)
80 (0.452)
63 (0.387)
75 (0.424)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs294557 Norway SZ
CTR
0.40
0.37
0.60
0.63
26 (0.160)
24 (0.136)
78 (0.479)
83 (0.469)
59 (0.362)
70 (0.395)
rs294557 Denmark SZ
CTR
0.43
0.38
0.57
0.62
78 (0.186)
145 (0.144)
206 (0.490)
474 (0.471)
136 (0.324)
387 (0.385)
rs294557 Sweden SZ
CTR
0.40
0.38
0.60
0.62
41 (0.160)
42 (0.143)
123 (0.479)
138 (0.471)
93 (0.362)
113 (0.386)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele T-Allele G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
 Caucasian
rs12101974 Sweden SZ
CTR
0.29
0.27
0.71
0.73
22 (0.086)
21 (0.072)
106 (0.412)
116 (0.396)
129 (0.502)
156 (0.532)
rs12101974 Denmark SZ
CTR
0.28
0.25
0.72
0.75
33 (0.079)
63 (0.063)
169 (0.402)
377 (0.375)
218 (0.519)
566 (0.563)
rs12101974 Norway SZ
CTR
0.29
0.25
0.71
0.75
14 (0.086)
11 (0.062)
67 (0.411)
66 (0.373)
82 (0.503)
100 (0.565)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele G-Allele T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
 Caucasian
rs7178612 Norway SZ
CTR
0.21
0.17
0.79
0.83
7 (0.043)
5 (0.028)
54 (0.331)
50 (0.282)
102 (0.626)
122 (0.689)
rs7178612 Denmark SZ
CTR
0.20
0.18
0.80
0.82
17 (0.040)
33 (0.033)
134 (0.319)
297 (0.295)
269 (0.640)
676 (0.672)
rs7178612 Sweden SZ
CTR
0.19
0.18
0.81
0.82
9 (0.035)
9 (0.031)
79 (0.307)
86 (0.294)
169 (0.658)
198 (0.676)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs1433944 Sweden SZ
CTR
0.32
0.35
0.68
0.65
26 (0.101)
36 (0.123)
112 (0.436)
133 (0.454)
119 (0.463)
124 (0.423)
rs1433944 Denmark SZ
CTR
0.32
0.33
0.68
0.67
43 (0.102)
110 (0.109)
183 (0.436)
445 (0.442)
194 (0.462)
451 (0.448)
rs1433944 Norway SZ
CTR
0.34
0.29
0.66
0.71
19 (0.117)
15 (0.085)
73 (0.448)
73 (0.412)
71 (0.436)
89 (0.503)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele G-Allele T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
 Caucasian
rs11852581 Norway SZ
CTR
0.25
0.22
0.75
0.78
10 (0.061)
9 (0.051)
61 (0.374)
60 (0.339)
92 (0.564)
108 (0.610)
rs11852581 Denmark SZ
CTR
0.24
0.23
0.76
0.77
24 (0.057)
53 (0.053)
153 (0.364)
356 (0.354)
243 (0.579)
597 (0.593)
rs11852581 Sweden SZ
CTR
0.25
0.23
0.75
0.77
16 (0.062)
15 (0.051)
96 (0.374)
104 (0.355)
145 (0.564)
174 (0.594)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs7176435 Sweden SZ
CTR
0.48
0.47
0.52
0.53
59 (0.230)
65 (0.222)
129 (0.502)
146 (0.498)
69 (0.268)
82 (0.280)
rs7176435 Denmark SZ
CTR
0.49
0.44
0.51
0.56
101 (0.240)
195 (0.194)
210 (0.500)
496 (0.493)
109 (0.260)
315 (0.313)
rs7176435 Norway SZ
CTR
0.47
0.45
0.53
0.55
36 (0.221)
36 (0.203)
81 (0.497)
87 (0.492)
46 (0.282)
54 (0.305)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs10152899 Norway SZ
CTR
0.19
0.16
0.81
0.84
6 (0.037)
5 (0.028)
50 (0.307)
48 (0.271)
107 (0.656)
124 (0.701)
rs10152899 Denmark SZ
CTR
0.20
0.18
0.80
0.82
17 (0.040)
33 (0.033)
134 (0.319)
297 (0.295)
269 (0.640)
676 (0.672)
rs10152899 Sweden SZ
CTR
0.17
0.18
0.83
0.82
7 (0.027)
9 (0.031)
73 (0.284)
86 (0.294)
177 (0.689)
198 (0.676)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs4984380 Sweden SZ
CTR
0.44
0.44
0.56
0.56
50 (0.195)
57 (0.195)
126 (0.490)
144 (0.491)
81 (0.315)
92 (0.314)
rs4984380 Denmark SZ
CTR
0.45
0.42
0.55
0.58
85 (0.202)
177 (0.176)
208 (0.495)
491 (0.488)
127 (0.302)
338 (0.336)
rs4984380 Norway SZ
CTR
0.44
0.41
0.56
0.59
32 (0.196)
30 (0.169)
80 (0.491)
85 (0.480)
51 (0.313)
62 (0.350)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele T-Allele G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
 Caucasian
rs12910914 Norway SZ
CTR
0.26
0.24
0.74
0.76
11 (0.067)
10 (0.056)
63 (0.387)
65 (0.367)
89 (0.546)
102 (0.576)
rs12910914 Denmark SZ
CTR
0.27
0.26
0.73
0.74
31 (0.074)
68 (0.068)
166 (0.395)
387 (0.385)
223 (0.531)
551 (0.548)
rs12910914 Sweden SZ
CTR
0.28
0.28
0.72
0.72
20 (0.078)
23 (0.078)
104 (0.405)
118 (0.403)
133 (0.518)
152 (0.519)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs1529776 Sweden SZ
CTR
0.17
0.17
0.83
0.83
7 (0.027)
8 (0.027)
73 (0.284)
83 (0.283)
177 (0.689)
202 (0.689)
rs1529776 Denmark SZ
CTR
0.18
0.18
0.82
0.82
14 (0.033)
33 (0.033)
124 (0.295)
297 (0.295)
282 (0.671)
676 (0.672)
rs1529776 Norway SZ
CTR
0.16
0.15
0.84
0.85
4 (0.025)
4 (0.023)
44 (0.270)
45 (0.254)
115 (0.706)
128 (0.723)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs11630899 Norway SZ
CTR
0.17
0.16
0.83
0.84
5 (0.031)
5 (0.028)
46 (0.282)
48 (0.271)
112 (0.687)
124 (0.701)
rs11630899 Denmark SZ
CTR
0.19
0.18
0.81
0.82
15 (0.036)
33 (0.033)
129 (0.307)
297 (0.295)
276 (0.657)
676 (0.672)
rs11630899 Sweden SZ
CTR
0.17
0.17
0.83
0.83
7 (0.027)
8 (0.027)
73 (0.284)
83 (0.283)
177 (0.689)
202 (0.689)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs10520749 Sweden SZ
CTR
0.36
0.32
0.64
0.68
33 (0.128)
30 (0.102)
119 (0.463)
128 (0.437)
105 (0.409)
135 (0.461)
rs10520749 Denmark SZ
CTR
0.36
0.34
0.64
0.66
54 (0.129)
116 (0.115)
194 (0.462)
452 (0.449)
172 (0.410)
438 (0.435)
rs10520749 Norway SZ
CTR
0.29
0.31
0.71
0.69
14 (0.086)
17 (0.096)
67 (0.411)
76 (0.429)
82 (0.503)
84 (0.475)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs12440504 Norway SZ
CTR
0.32
0.35
0.68
0.65
17 (0.104)
22 (0.124)
71 (0.436)
80 (0.452)
75 (0.460)
75 (0.424)
rs12440504 Denmark SZ
CTR
0.32
0.35
0.68
0.65
43 (0.102)
123 (0.122)
183 (0.436)
458 (0.455)
194 (0.462)
425 (0.422)
rs12440504 Sweden SZ
CTR
0.36
0.33
0.64
0.67
33 (0.128)
32 (0.109)
119 (0.463)
130 (0.444)
105 (0.409)
131 (0.447)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs17630733 Sweden SZ
CTR
0.13
0.15
0.87
0.85
4 (0.016)
7 (0.024)
58 (0.226)
75 (0.256)
195 (0.759)
211 (0.720)
rs17630733 Denmark SZ
CTR
0.15
0.13
0.85
0.87
9 (0.021)
17 (0.017)
107 (0.255)
228 (0.227)
304 (0.724)
761 (0.756)
rs17630733 Norway SZ
CTR
0.13
0.11
0.87
0.89
3 (0.018)
2 (0.011)
37 (0.227)
35 (0.198)
123 (0.755)
140 (0.791)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele T-Allele A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
 Caucasian
rs7163806 Norway SZ
CTR
0.34
0.36
0.66
0.64
19 (0.117)
23 (0.130)
73 (0.448)
82 (0.463)
71 (0.436)
72 (0.407)
rs7163806 Denmark SZ
CTR
0.35
0.34
0.65
0.66
51 (0.121)
116 (0.115)
191 (0.455)
452 (0.449)
178 (0.424)
438 (0.435)
rs7163806 Sweden SZ
CTR
0.32
0.31
0.68
0.69
26 (0.101)
28 (0.096)
112 (0.436)
125 (0.427)
119 (0.463)
140 (0.478)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs8025603 Sweden SZ
CTR
0.26
0.31
0.74
0.69
17 (0.066)
28 (0.096)
99 (0.385)
125 (0.427)
141 (0.549)
140 (0.478)
rs8025603 Denmark SZ
CTR
0.29
0.26
0.71
0.74
35 (0.083)
68 (0.068)
173 (0.412)
387 (0.385)
212 (0.505)
551 (0.548)
rs8025603 Norway SZ
CTR
0.28
0.21
0.72
0.79
13 (0.080)
8 (0.045)
66 (0.405)
59 (0.333)
84 (0.515)
110 (0.621)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs1991897 Norway SZ
CTR
0.25
0.26
0.75
0.74
10 (0.061)
12 (0.068)
61 (0.374)
68 (0.384)
92 (0.564)
97 (0.548)
rs1991897 Denmark SZ
CTR
0.31
0.25
0.69
0.75
40 (0.095)
63 (0.063)
180 (0.429)
377 (0.375)
200 (0.476)
566 (0.563)
rs1991897 Sweden SZ
CTR
0.28
0.28
0.72
0.72
20 (0.078)
23 (0.078)
104 (0.405)
118 (0.403)
133 (0.518)
152 (0.519)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs11633291 Sweden SZ
CTR
0.49
0.48
0.51
0.52
62 (0.241)
68 (0.232)
128 (0.498)
146 (0.498)
67 (0.261)
79 (0.270)
rs11633291 Denmark SZ
CTR
0.47
0.46
0.53
0.54
93 (0.221)
213 (0.212)
209 (0.498)
500 (0.497)
118 (0.281)
293 (0.291)
rs11633291 Norway SZ
CTR
0.46
0.46
0.54
0.54
34 (0.209)
37 (0.209)
81 (0.497)
88 (0.497)
48 (0.294)
52 (0.294)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs4984390 Norway SZ
CTR
0.33
0.34
0.67
0.66
18 (0.110)
20 (0.113)
72 (0.442)
80 (0.452)
73 (0.448)
77 (0.435)
rs4984390 Denmark SZ
CTR
0.36
0.31
0.64
0.69
54 (0.129)
97 (0.096)
194 (0.462)
430 (0.427)
172 (0.410)
479 (0.476)
rs4984390 Sweden SZ
CTR
0.35
0.32
0.65
0.68
31 (0.121)
30 (0.102)
117 (0.455)
128 (0.437)
109 (0.424)
135 (0.461)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs2117214 Sweden SZ
CTR
0.39
0.40
0.61
0.60
39 (0.152)
47 (0.160)
122 (0.475)
141 (0.481)
96 (0.374)
105 (0.358)
rs2117214 Denmark SZ
CTR
0.37
0.38
0.63
0.62
57 (0.136)
145 (0.144)
196 (0.467)
474 (0.471)
167 (0.398)
387 (0.385)
rs2117214 Norway SZ
CTR
0.40
0.39
0.60
0.61
26 (0.160)
27 (0.153)
78 (0.479)
84 (0.475)
59 (0.362)
66 (0.373)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs4984391 Norway SZ
CTR
0.34
0.34
0.66
0.66
19 (0.117)
20 (0.113)
73 (0.448)
80 (0.452)
71 (0.436)
77 (0.435)
rs4984391 Denmark SZ
CTR
0.31
0.32
0.69
0.68
40 (0.095)
103 (0.102)
180 (0.429)
438 (0.435)
200 (0.476)
465 (0.462)
rs4984391 Sweden SZ
CTR
0.34
0.36
0.66
0.64
30 (0.117)
38 (0.130)
115 (0.447)
135 (0.461)
112 (0.436)
120 (0.410)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs7180682 Sweden SZ
CTR
0.38
0.39
0.62
0.61
37 (0.144)
45 (0.154)
121 (0.471)
139 (0.474)
99 (0.385)
109 (0.372)
rs7180682 Denmark SZ
CTR
0.43
0.41
0.57
0.59
78 (0.186)
169 (0.168)
206 (0.490)
487 (0.484)
136 (0.324)
350 (0.348)
rs7180682 Norway SZ
CTR
0.41
0.43
0.59
0.57
27 (0.166)
33 (0.186)
79 (0.485)
87 (0.492)
57 (0.350)
57 (0.322)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs3784647 Norway SZ
CTR
0.23
0.20
0.77
0.80
9 (0.055)
7 (0.040)
58 (0.352)
57 (0.322)
98 (0.594)
113 (0.638)
rs3784647 Denmark SZ
CTR
0.23
0.20
0.77
0.80
22 (0.052)
40 (0.040)
149 (0.355)
322 (0.320)
249 (0.593)
644 (0.640)
rs3784647 Sweden SZ
CTR
0.20
0.21
0.80
0.79
10 (0.039)
13 (0.044)
82 (0.319)
97 (0.331)
165 (0.642)
183 (0.625)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs8027043 Sweden SZ
CTR
0.18
0.20
0.82
0.80
8 (0.031)
12 (0.041)
76 (0.296)
94 (0.321)
173 (0.673)
187 (0.638)
rs8027043 Denmark SZ
CTR
0.15
0.19
0.85
0.81
9 (0.021)
36 (0.036)
107 (0.255)
310 (0.308)
304 (0.724)
660 (0.656)
rs8027043 Norway SZ
CTR
0.17
0.18
0.83
0.82
5 (0.031)
6 (0.034)
46 (0.282)
52 (0.294)
112 (0.687)
119 (0.672)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs17631184 Norway SZ
CTR
0.18
0.16
0.82
0.84
5 (0.031)
5 (0.028)
48 (0.294)
48 (0.271)
110 (0.675)
124 (0.701)
rs17631184 Denmark SZ
CTR
0.16
0.17
0.84
0.83
11 (0.026)
29 (0.029)
113 (0.269)
284 (0.282)
296 (0.705)
693 (0.689)
rs17631184 Sweden SZ
CTR
0.19
0.16
0.81
0.84
9 (0.035)
8 (0.027)
79 (0.307)
79 (0.270)
169 (0.658)
206 (0.703)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele T-Allele A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
 Caucasian
rs2552175 Sweden SZ
CTR
0.23
0.28
0.77
0.72
14 (0.054)
23 (0.078)
91 (0.354)
118 (0.403)
152 (0.591)
152 (0.519)
rs2552175 Denmark SZ
CTR
0.22
0.22
0.78
0.78
20 (0.048)
49 (0.049)
144 (0.343)
345 (0.343)
256 (0.610)
612 (0.608)
rs2552175 Norway SZ
CTR
0.20
0.21
0.80
0.79
7 (0.043)
8 (0.045)
52 (0.319)
59 (0.333)
104 (0.638)
110 (0.621)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs293577 Norway SZ
CTR
0.25
0.25
0.75
0.75
10 (0.061)
11 (0.062)
61 (0.374)
66 (0.373)
92 (0.564)
100 (0.565)
rs293577 Denmark SZ
CTR
0.24
0.25
0.76
0.75
24 (0.057)
63 (0.063)
153 (0.364)
377 (0.375)
243 (0.579)
566 (0.563)
rs293577 Sweden SZ
CTR
0.27
0.27
0.73
0.73
19 (0.074)
21 (0.072)
101 (0.393)
116 (0.396)
137 (0.533)
156 (0.532)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs11074279 Sweden SZ
CTR
0.29
0.32
0.71
0.68
22 (0.086)
30 (0.102)
106 (0.412)
128 (0.437)
129 (0.502)
135 (0.461)
rs11074279 Denmark SZ
CTR
0.32
0.31
0.68
0.69
43 (0.102)
97 (0.096)
183 (0.436)
430 (0.427)
194 (0.462)
479 (0.476)
rs11074279 Norway SZ
CTR
0.32
0.36
0.68
0.64
17 (0.104)
23 (0.130)
71 (0.436)
82 (0.463)
75 (0.460)
72 (0.407)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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