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Printable version
Polymorphism Details
Study:
Potkin, 2009
Gene:
ARHGAP18
(FLJ25728; MGC126757; MGC138145; MacGAP; bA307O14.2)
Protein:
Rho GTPase activating protein 18
Chromosome:
6
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 15 January 2010
Total number of polymorphisms investigated by this study: 60
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Caucasian
rs7760943
USA
SZ
CTR
0.27
0.22
0.73
0.78
6 (0.073)
4 (0.044)
33 (0.402)
31 (0.344)
43 (0.524)
55 (0.611)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Caucasian
rs2571588
USA
SZ
CTR
0.34
0.41
0.66
0.59
9 (0.110)
15 (0.165)
37 (0.451)
44 (0.484)
36 (0.439)
32 (0.352)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs10457525
USA
SZ
CTR
0.22
0.20
0.78
0.80
4 (0.049)
4 (0.044)
28 (0.341)
29 (0.319)
50 (0.610)
58 (0.637)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs9321172
USA
SZ
CTR
0.27
0.30
0.73
0.70
6 (0.073)
8 (0.088)
32 (0.390)
38 (0.418)
44 (0.537)
45 (0.495)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs17810534
USA
SZ
CTR
0.13
0.15
0.87
0.85
1 (0.012)
2 (0.022)
19 (0.232)
23 (0.253)
62 (0.756)
66 (0.725)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs9385500
USA
SZ
CTR
0.36
0.33
0.64
0.67
11 (0.133)
10 (0.110)
38 (0.458)
40 (0.440)
34 (0.410)
41 (0.451)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs13214956
USA
SZ
CTR
0.07
0.05
0.93
0.95
0 (0.000)
0 (0.000)
11 (0.134)
9 (0.099)
71 (0.866)
82 (0.901)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs10457526
USA
SZ
CTR
0.22
0.22
0.78
0.78
4 (0.049)
4 (0.044)
28 (0.341)
31 (0.344)
50 (0.610)
55 (0.611)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs12197456
USA
SZ
CTR
0.04
0.04
0.96
0.96
0 (0.000)
0 (0.000)
6 (0.073)
7 (0.077)
76 (0.927)
84 (0.923)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs9492347
USA
SZ
CTR
0.24
0.28
0.76
0.72
5 (0.061)
7 (0.077)
30 (0.366)
37 (0.407)
47 (0.573)
47 (0.516)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs6935162
USA
SZ
CTR
0.31
0.27
0.69
0.73
8 (0.098)
7 (0.077)
35 (0.427)
36 (0.396)
39 (0.476)
48 (0.527)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs4504494
USA
SZ
CTR
0.12
0.10
0.88
0.90
1 (0.012)
1 (0.011)
17 (0.207)
16 (0.176)
64 (0.780)
74 (0.813)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs7758025
USA
SZ
CTR
0.16
0.17
0.84
0.83
2 (0.024)
3 (0.033)
22 (0.268)
26 (0.283)
58 (0.707)
63 (0.685)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs10499162
USA
SZ
CTR
0.14
0.14
0.86
0.86
2 (0.024)
2 (0.022)
20 (0.241)
21 (0.228)
61 (0.735)
69 (0.750)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs9321174
USA
SZ
CTR
0.35
0.37
0.65
0.63
10 (0.122)
12 (0.133)
37 (0.451)
42 (0.467)
35 (0.427)
36 (0.400)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs12530181
USA
SZ
CTR
0.18
0.17
0.82
0.83
3 (0.037)
3 (0.033)
24 (0.293)
26 (0.283)
55 (0.671)
63 (0.685)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs9375638
USA
SZ
CTR
0.23
0.23
0.77
0.77
4 (0.049)
5 (0.055)
29 (0.354)
32 (0.352)
49 (0.598)
54 (0.593)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs9375641
USA
SZ
CTR
0.44
0.42
0.56
0.58
16 (0.195)
16 (0.176)
40 (0.488)
44 (0.484)
26 (0.317)
31 (0.341)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs12664247
USA
SZ
CTR
0.29
0.30
0.71
0.70
7 (0.085)
8 (0.088)
34 (0.415)
38 (0.418)
41 (0.500)
45 (0.495)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs4509146
USA
SZ
CTR
0.29
0.30
0.71
0.70
7 (0.085)
8 (0.088)
34 (0.415)
38 (0.418)
41 (0.500)
45 (0.495)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs9402155
USA
SZ
CTR
0.17
0.23
0.83
0.77
2 (0.025)
5 (0.055)
23 (0.284)
32 (0.352)
56 (0.691)
54 (0.593)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs9483050
USA
SZ
CTR
0.25
0.22
0.75
0.78
5 (0.061)
4 (0.044)
31 (0.378)
31 (0.344)
46 (0.561)
55 (0.611)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs10499163
USA
SZ
CTR
0.27
0.28
0.73
0.72
6 (0.073)
7 (0.077)
32 (0.390)
37 (0.407)
44 (0.537)
47 (0.516)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs9372944
USA
SZ
CTR
0.19
0.23
0.81
0.77
3 (0.037)
5 (0.055)
25 (0.305)
32 (0.352)
54 (0.659)
54 (0.593)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs9398913
USA
SZ
CTR
0.40
0.37
0.60
0.63
13 (0.159)
12 (0.133)
39 (0.476)
42 (0.467)
30 (0.366)
36 (0.400)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
C-Allele
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
Caucasian
rs4479964
USA
SZ
CTR
0.33
0.30
0.67
0.70
9 (0.110)
8 (0.088)
36 (0.439)
38 (0.418)
37 (0.451)
45 (0.495)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs9388721
USA
SZ
CTR
0.17
0.19
0.83
0.81
2 (0.025)
3 (0.033)
23 (0.284)
28 (0.308)
56 (0.691)
60 (0.659)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs4499954
USA
SZ
CTR
0.23
0.26
0.77
0.74
4 (0.049)
6 (0.066)
29 (0.354)
35 (0.385)
49 (0.598)
50 (0.549)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs6922711
USA
SZ
CTR
0.49
0.43
0.51
0.57
20 (0.244)
17 (0.185)
41 (0.500)
45 (0.489)
21 (0.256)
30 (0.326)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs13203608
USA
SZ
CTR
0.09
0.08
0.91
0.92
1 (0.012)
1 (0.011)
13 (0.159)
13 (0.143)
68 (0.829)
77 (0.846)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs11154490
USA
SZ
CTR
0.27
0.30
0.73
0.70
6 (0.073)
8 (0.088)
32 (0.390)
38 (0.418)
44 (0.537)
45 (0.495)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs9388724
USA
SZ
CTR
0.17
0.22
0.83
0.78
2 (0.025)
4 (0.044)
23 (0.284)
31 (0.344)
56 (0.691)
55 (0.611)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs2051632
USA
SZ
CTR
0.41
0.46
0.59
0.54
14 (0.171)
19 (0.209)
40 (0.488)
45 (0.495)
28 (0.341)
27 (0.297)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs11154491
USA
SZ
CTR
0.11
0.12
0.89
0.88
1 (0.012)
1 (0.011)
16 (0.195)
19 (0.211)
65 (0.793)
70 (0.778)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs1041915
USA
SZ
CTR
0.10
0.12
0.90
0.88
1 (0.012)
1 (0.011)
15 (0.183)
19 (0.211)
66 (0.805)
70 (0.778)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Caucasian
rs13208724
USA
SZ
CTR
0.23
0.29
0.77
0.71
4 (0.049)
8 (0.088)
29 (0.354)
37 (0.407)
49 (0.598)
46 (0.505)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
C-Allele
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
Caucasian
rs1476042
USA
SZ
CTR
0.30
0.24
0.70
0.76
7 (0.086)
5 (0.055)
34 (0.420)
33 (0.363)
40 (0.494)
53 (0.582)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs1894641
USA
SZ
CTR
0.18
0.14
0.82
0.86
3 (0.037)
2 (0.022)
24 (0.293)
22 (0.242)
55 (0.671)
67 (0.736)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs1023480
USA
SZ
CTR
0.55
0.44
0.45
0.56
25 (0.301)
18 (0.196)
41 (0.494)
45 (0.489)
17 (0.205)
29 (0.315)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs2032533
USA
SZ
CTR
0.32
0.25
0.68
0.75
8 (0.098)
6 (0.066)
36 (0.439)
34 (0.374)
38 (0.463)
51 (0.560)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs3752536
USA
SZ
CTR
0.16
0.14
0.84
0.86
2 (0.024)
2 (0.022)
22 (0.268)
21 (0.228)
58 (0.707)
69 (0.750)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs12213388
USA
SZ
CTR
0.17
0.11
0.83
0.89
2 (0.025)
1 (0.011)
23 (0.284)
18 (0.198)
56 (0.691)
72 (0.791)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs9385512
USA
SZ
CTR
0.25
0.30
0.75
0.70
5 (0.061)
8 (0.088)
31 (0.378)
38 (0.418)
46 (0.561)
45 (0.495)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs1984408
USA
SZ
CTR
0.32
0.34
0.68
0.66
8 (0.098)
11 (0.120)
36 (0.439)
41 (0.446)
38 (0.463)
40 (0.435)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs9398918
USA
SZ
CTR
0.21
0.14
0.79
0.86
4 (0.049)
2 (0.022)
27 (0.329)
22 (0.242)
51 (0.622)
67 (0.736)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs7753327
USA
SZ
CTR
0.35
0.43
0.65
0.57
10 (0.122)
17 (0.185)
37 (0.451)
45 (0.489)
35 (0.427)
30 (0.326)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs17469847
USA
SZ
CTR
0.20
0.17
0.80
0.83
3 (0.037)
3 (0.033)
26 (0.321)
26 (0.283)
52 (0.642)
63 (0.685)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs376632
USA
SZ
CTR
0.13
0.14
0.87
0.86
1 (0.012)
2 (0.022)
19 (0.232)
21 (0.228)
62 (0.756)
69 (0.750)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs208869
USA
SZ
CTR
0.48
0.44
0.52
0.56
19 (0.232)
18 (0.196)
41 (0.500)
45 (0.489)
22 (0.268)
29 (0.315)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs10484284
USA
SZ
CTR
0.15
0.16
0.85
0.84
2 (0.024)
2 (0.022)
21 (0.256)
24 (0.267)
59 (0.720)
64 (0.711)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs208870
USA
SZ
CTR
0.07
0.07
0.93
0.93
0 (0.000)
0 (0.000)
11 (0.134)
12 (0.132)
71 (0.866)
79 (0.868)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Caucasian
rs10484283
USA
SZ
CTR
0.07
0.05
0.93
0.95
0 (0.000)
0 (0.000)
11 (0.134)
9 (0.099)
71 (0.866)
82 (0.901)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs10484282
USA
SZ
CTR
0.23
0.28
0.77
0.72
4 (0.049)
7 (0.077)
29 (0.354)
37 (0.407)
49 (0.598)
47 (0.516)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs9402168
USA
SZ
CTR
0.37
0.39
0.63
0.61
11 (0.134)
14 (0.154)
38 (0.463)
43 (0.473)
33 (0.402)
34 (0.374)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
G-Allele
T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
Caucasian
rs17057773
USA
SZ
CTR
0.05
0.06
0.95
0.94
0 (0.000)
0 (0.000)
8 (0.098)
10 (0.111)
74 (0.902)
80 (0.889)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs208865
USA
SZ
CTR
0.06
0.07
0.94
0.93
0 (0.000)
0 (0.000)
9 (0.111)
12 (0.132)
72 (0.889)
79 (0.868)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Caucasian
rs9388732
USA
SZ
CTR
0.24
0.27
0.76
0.73
5 (0.061)
7 (0.077)
30 (0.366)
36 (0.396)
47 (0.573)
48 (0.527)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Caucasian
rs17057830
USA
SZ
CTR
0.10
0.11
0.90
0.89
1 (0.012)
1 (0.011)
15 (0.183)
18 (0.198)
66 (0.805)
72 (0.791)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Caucasian
rs4897336
USA
SZ
CTR
0.10
0.14
0.90
0.86
1 (0.012)
2 (0.022)
15 (0.183)
22 (0.242)
66 (0.805)
67 (0.736)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
T-Allele
G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
Caucasian
rs208872
USA
SZ
CTR
0.09
0.07
0.91
0.93
1 (0.012)
0 (0.000)
12 (0.146)
12 (0.132)
69 (0.841)
79 (0.868)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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