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Polymorphism Details
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Status: |
Updated 21 October 2010
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Total number of polymorphisms investigated by this study: 31 |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
del-Allele |
ins-Allele |
del/del (frequency) |
del/ins (frequency) |
ins/ins (frequency) |
Caucasian |
rs1799732 (-141indel)
|
USA, Australia |
SZ CTR |
0.11 0.09 |
0.89 0.91 |
21 (0.011) 18 (0.009) |
354 (0.189) 341 (0.170) |
1495 (0.799) 1643 (0.821) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs1801028 (Ser311Cys)
|
USA, Australia |
SZ CTR |
0.02 0.03 |
0.98 0.97 |
1 (0.001) 1 (0.000) |
73 (0.039) 105 (0.052) |
1796 (0.960) 1895 (0.947) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs6277 (Pro319Pro)
|
USA, Australia |
SZ CTR |
0.47 0.47 |
0.53 0.53 |
411 (0.220) 435 (0.217) |
931 (0.498) 996 (0.498) |
527 (0.282) 571 (0.285) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs6275 (His313His)
|
USA, Australia |
SZ CTR |
0.30 0.29 |
0.70 0.71 |
171 (0.091) 173 (0.086) |
788 (0.421) 831 (0.415) |
911 (0.487) 998 (0.499) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
rs4648318
|
USA, Australia |
SZ CTR |
0.25 0.25 |
0.75 0.75 |
121 (0.065) 127 (0.063) |
709 (0.379) 755 (0.377) |
1041 (0.556) 1120 (0.559) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
T-Allele |
G/G (frequency) |
G/T (frequency) |
T/T (frequency) |
Caucasian |
rs1079594
|
USA, Australia |
SZ CTR |
0.16 0.16 |
0.84 0.84 |
46 (0.025) 49 (0.024) |
492 (0.263) 527 (0.263) |
1332 (0.712) 1426 (0.712) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
m-Allele |
M-Allele |
m/m (frequency) |
m/M (frequency) |
M/M (frequency) |
Caucasian |
rs1076563
|
USA, Australia |
SZ CTR |
0.41 0.40 |
0.59 0.60 |
310 (0.166) 325 (0.162) |
903 (0.483) 963 (0.481) |
658 (0.352) 714 (0.357) |
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
C-Allele |
A/A (frequency) |
A/C (frequency) |
C/C (frequency) |
Caucasian |
rs7131056
|
USA, Australia |
SZ CTR |
0.45 0.42 |
0.55 0.58 |
382 (0.204) 360 (0.180) |
926 (0.495) 978 (0.489) |
562 (0.301) 664 (0.332) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs7125415
|
USA, Australia |
SZ CTR |
0.10 0.09 |
0.90 0.91 |
18 (0.010) 18 (0.009) |
328 (0.175) 341 (0.170) |
1525 (0.815) 1643 (0.821) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs7116768
|
USA, Australia |
SZ CTR |
0.11 0.09 |
0.89 0.91 |
21 (0.011) 18 (0.009) |
354 (0.189) 344 (0.172) |
1495 (0.799) 1640 (0.819) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C (frequency) |
C/G (frequency) |
G/G (frequency) |
Caucasian |
rs6279
|
USA, Australia |
SZ CTR |
0.31 0.31 |
0.69 0.69 |
183 (0.098) 192 (0.096) |
804 (0.430) 856 (0.428) |
883 (0.472) 953 (0.476) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
C-Allele |
A/A (frequency) |
A/C (frequency) |
C/C (frequency) |
Caucasian |
rs6278
|
USA, Australia |
SZ CTR |
0.16 0.15 |
0.84 0.85 |
46 (0.025) 47 (0.023) |
495 (0.265) 522 (0.261) |
1329 (0.711) 1433 (0.716) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs4938019
|
USA, Australia |
SZ CTR |
0.14 0.14 |
0.86 0.86 |
39 (0.021) 39 (0.019) |
461 (0.247) 479 (0.239) |
1370 (0.733) 1484 (0.741) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs4936271
|
USA, Australia |
SZ CTR |
0.46 0.48 |
0.54 0.52 |
397 (0.212) 467 (0.233) |
929 (0.497) 1000 (0.500) |
543 (0.291) 535 (0.267) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs4581480
|
USA, Australia |
SZ CTR |
0.11 0.10 |
0.89 0.90 |
21 (0.011) 18 (0.009) |
357 (0.191) 347 (0.173) |
1491 (0.798) 1636 (0.818) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs4436578
|
USA, Australia |
SZ CTR |
0.13 0.13 |
0.87 0.87 |
30 (0.016) 32 (0.016) |
415 (0.222) 441 (0.220) |
1425 (0.762) 1529 (0.764) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
C-Allele |
A/A (frequency) |
A/C (frequency) |
C/C (frequency) |
Caucasian |
rs4350392
|
USA, Australia |
SZ CTR |
0.14 0.14 |
0.86 0.86 |
39 (0.021) 39 (0.019) |
461 (0.247) 482 (0.241) |
1370 (0.733) 1481 (0.740) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs4245148
|
USA, Australia |
SZ CTR |
0.11 0.10 |
0.89 0.90 |
24 (0.013) 22 (0.011) |
375 (0.201) 373 (0.186) |
1471 (0.787) 1607 (0.803) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs4245147
|
USA, Australia |
SZ CTR |
0.46 0.48 |
0.54 0.52 |
397 (0.212) 469 (0.234) |
929 (0.497) 1000 (0.500) |
543 (0.291) 533 (0.266) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
G-Allele |
T/T (frequency) |
T/G (frequency) |
G/G (frequency) |
Caucasian |
rs2734841
|
USA, Australia |
SZ CTR |
0.31 0.31 |
0.69 0.69 |
182 (0.097) 192 (0.096) |
803 (0.429) 856 (0.428) |
885 (0.473) 953 (0.476) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs2734838
|
USA, Australia |
SZ CTR |
0.41 0.40 |
0.59 0.60 |
311 (0.166) 325 (0.162) |
903 (0.483) 963 (0.481) |
655 (0.350) 714 (0.357) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs2511521
|
USA, Australia |
SZ CTR |
0.26 0.25 |
0.74 0.75 |
123 (0.066) 123 (0.061) |
712 (0.381) 747 (0.373) |
1035 (0.553) 1132 (0.565) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs2440390
|
USA, Australia |
SZ CTR |
0.13 0.13 |
0.87 0.87 |
32 (0.017) 32 (0.016) |
426 (0.228) 444 (0.222) |
1412 (0.755) 1526 (0.762) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs1799978
|
USA, Australia |
SZ CTR |
0.05 0.05 |
0.95 0.95 |
5 (0.003) 6 (0.003) |
184 (0.098) 201 (0.100) |
1681 (0.899) 1795 (0.897) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs17529477
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USA, Australia |
SZ CTR |
0.30 0.32 |
0.70 0.68 |
165 (0.088) 208 (0.104) |
781 (0.418) 874 (0.437) |
924 (0.494) 920 (0.460) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs1554929
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USA, Australia |
SZ CTR |
0.47 0.47 |
0.53 0.53 |
413 (0.221) 437 (0.218) |
932 (0.498) 997 (0.498) |
525 (0.281) 569 (0.284) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs12800853
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USA, Australia |
SZ CTR |
0.41 0.41 |
0.59 0.59 |
314 (0.168) 333 (0.166) |
905 (0.484) 967 (0.483) |
651 (0.348) 702 (0.351) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs12364283
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USA, Australia |
SZ CTR |
0.08 0.08 |
0.92 0.92 |
12 (0.006) 12 (0.006) |
275 (0.147) 285 (0.142) |
1583 (0.847) 1706 (0.852) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs1107162
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USA, Australia |
SZ CTR |
0.41 0.40 |
0.59 0.60 |
311 (0.166) 327 (0.163) |
903 (0.483) 964 (0.482) |
655 (0.350) 711 (0.355) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs1079596
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USA, Australia |
SZ CTR |
0.15 0.15 |
0.85 0.85 |
43 (0.023) 48 (0.024) |
482 (0.258) 524 (0.262) |
1345 (0.719) 1429 (0.714) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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G-Allele |
T-Allele |
G/G (frequency) |
G/T (frequency) |
T/T (frequency) |
Caucasian |
rs1079595
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USA, Australia |
SZ CTR |
0.16 0.16 |
0.84 0.84 |
46 (0.025) 49 (0.024) |
492 (0.263) 527 (0.263) |
1332 (0.712) 1426 (0.712) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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