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Meta-Analysis of All Published SZ Association Studies (Case-Control Only) rs1005573
Back Search Methods Disclaimer Credits
 Polymorphism: rs1005573
 Gene: OLIG2  (BHLHB1; OLIGO2; RACK17; PRKCBP2)  Entrez Gene    View on AlzGene
 Protein: oligodendrocyte lineage transcription factor 2  (protein kinase C binding protein 2; human protein kinase C-binding protein RACK17; basic domain, helix-loop-helix protein, class B, 1; oligodendrocyte-specific bHLH transcription factor 2)  ProteinLink
 Chromosome: 21   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 22 October 2010
Gene Overview
 Polymorphism:
1) Summary of Allele and Genotype Distribution of all Published Association Studies (by Ethnic Group)
      Alleles Genotypes
  # Case-Control
Samples
  C-Allele
(frequency)
T-Allele
(frequency)
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian 2 SZ
CTR
0.30
0.34
0.70
0.66
76 (0.090)
105 (0.117)
354 (0.419)
403 (0.451)
415 (0.491)
386 (0.432)
 Asian 2 SZ
CTR
0.61
0.61
0.39
0.39
394 (0.376)
383 (0.384)
501 (0.478)
459 (0.460)
154 (0.147)
155 (0.155)
Total 4 SZ
CTR
0.47
0.49
0.53
0.51
470 (0.248)
488 (0.258)
855 (0.451)
862 (0.456)
569 (0.300)
541 (0.286)

Meta-Analysis Methods      * New * Cumulative Meta-analysis
2) Forest plot for polymorphism  rs1005573

Please also see disclaimer for more information on these meta-analyses.


Meta-analyses have not been performed on the following polymorphisms since they lack published genotype data in at least four independent case-control samples, or the published genotype data was otherwise not eligible for inclusion (see methods for details):

33322832C/A
33322853G/A
rs1059004
rs1122807
rs11701698
rs11701762
rs13046814
rs2834070
rs2834072
rs6517135
rs6517137
rs762237
rs881666
rs9653711
rs9975039
rs9978551

SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
ALSGene
AlzGene
MSGene
PDGene
SZGene
An up-to-date collection of all published genetic association studies.
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