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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Olsen, 2008
 Gene: GSK3B   Entrez Gene    View on AlzGene   View on MSGene   View on PDGene
 Protein: glycogen synthase kinase 3 beta   ProteinLink
 Chromosome: 3   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 23 June 2008
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 34

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs4688054 Scandinavia SZ
CTR
0.19
0.18
0.81
0.82
28 (0.037)
41 (0.032)
235 (0.307)
376 (0.295)
502 (0.656)
857 (0.673)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs10934503 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs4624596 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)


Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs10934502 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs10934505 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs10934506 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele C-Allele A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian
rs11925868 Scandinavia SZ
CTR
0.14
0.15
0.86
0.85
15 (0.020)
29 (0.023)
184 (0.241)
325 (0.255)
566 (0.740)
920 (0.722)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs12053912 Scandinavia SZ
CTR
0.18
0.17
0.82
0.83
25 (0.033)
37 (0.029)
226 (0.295)
360 (0.282)
514 (0.672)
878 (0.689)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs12629015 Scandinavia SZ
CTR
0.18
0.19
0.82
0.81
25 (0.033)
46 (0.036)
226 (0.295)
392 (0.308)
514 (0.672)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs12634889 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs13080945 Scandinavia SZ
CTR
0.01
0.02
0.99
0.98
0 (0.000)
1 (0.001)
15 (0.020)
50 (0.039)
750 (0.980)
1224 (0.960)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs1381841 Scandinavia SZ
CTR
0.11
0.12
0.89
0.88
9 (0.012)
18 (0.014)
150 (0.196)
269 (0.211)
606 (0.792)
987 (0.775)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs1574154 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs16830720 Scandinavia SZ
CTR
0.06
0.06
0.94
0.94
3 (0.004)
5 (0.004)
86 (0.112)
144 (0.113)
676 (0.884)
1126 (0.883)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs17204365 Scandinavia SZ
CTR
0.03
0.03
0.97
0.97
1 (0.001)
1 (0.001)
45 (0.059)
74 (0.058)
720 (0.940)
1199 (0.941)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs17471 Scandinavia SZ
CTR
0.10
0.09
0.90
0.91
8 (0.010)
10 (0.008)
138 (0.180)
209 (0.164)
620 (0.809)
1055 (0.828)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs1870931 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs2199503 Scandinavia SZ
CTR
0.31
0.29
0.69
0.71
74 (0.097)
107 (0.084)
327 (0.427)
525 (0.412)
364 (0.476)
642 (0.504)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele A-Allele C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
 Caucasian
rs2873950 Scandinavia SZ
CTR
0.19
0.18
0.81
0.82
28 (0.037)
41 (0.032)
235 (0.307)
376 (0.295)
502 (0.656)
857 (0.673)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs334538 Scandinavia SZ
CTR
0.17
0.18
0.83
0.82
22 (0.029)
41 (0.032)
216 (0.282)
376 (0.295)
527 (0.689)
857 (0.673)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele A-Allele C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
 Caucasian
rs334543 Scandinavia SZ
CTR
0.32
0.30
0.68
0.70
78 (0.102)
115 (0.090)
333 (0.435)
535 (0.420)
354 (0.463)
624 (0.490)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs334547 Scandinavia SZ
CTR
0.10
0.10
0.90
0.90
8 (0.010)
13 (0.010)
138 (0.180)
229 (0.180)
620 (0.809)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele C-Allele A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian
rs334550 Scandinavia SZ
CTR
0.35
0.35
0.65
0.65
94 (0.123)
156 (0.122)
348 (0.455)
580 (0.455)
323 (0.422)
538 (0.422)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs334555 Scandinavia SZ
CTR
0.16
0.15
0.84
0.85
20 (0.026)
29 (0.023)
206 (0.269)
325 (0.255)
540 (0.705)
920 (0.722)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs4340737 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs4688046 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs4688059 Scandinavia SZ
CTR
0.19
0.18
0.81
0.82
28 (0.037)
41 (0.032)
235 (0.307)
376 (0.295)
502 (0.656)
857 (0.673)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs6438552 Scandinavia SZ
CTR
0.37
0.39
0.63
0.61
105 (0.137)
194 (0.152)
357 (0.466)
606 (0.476)
304 (0.397)
474 (0.372)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs6797689 Scandinavia SZ
CTR
0.06
0.07
0.94
0.93
3 (0.004)
6 (0.005)
86 (0.112)
166 (0.130)
676 (0.884)
1102 (0.865)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs6808874 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs749768 Scandinavia SZ
CTR
0.30
0.30
0.70
0.70
69 (0.090)
115 (0.090)
321 (0.420)
535 (0.420)
375 (0.490)
624 (0.490)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele T-Allele A/A
(frequency)
A/T
(frequency)
T/T
(frequency)
 Caucasian
rs7639388 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs9861883 Scandinavia SZ
CTR
0.19
0.19
0.81
0.81
28 (0.037)
46 (0.036)
235 (0.307)
392 (0.308)
502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs9872302 Scandinavia SZ
CTR
0.16
0.16
0.84
0.84
20 (0.026)
33 (0.026)
206 (0.269)
342 (0.268)
540 (0.705)
899 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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