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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Olsen, 2008
 Gene: GSK3B   Entrez Gene    View on AlzGene   View on MSGene   View on PDGene
 Protein: glycogen synthase kinase 3 beta   ProteinLink
 Chromosome: 3   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 23 June 2008
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 34

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs4688054 Scandinavia SZ
CTR		 0.19
0.18		 0.81
0.82		 28 (0.037)
41 (0.032)		 235 (0.307)
376 (0.295)		 502 (0.656)
857 (0.673)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs10934503 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs4624596 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)


Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs10934502 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele A-Allele T/T
(frequency)		 T/A
(frequency)		 A/A
(frequency)
 Caucasian
rs10934505 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs10934506 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele C-Allele A/A
(frequency)		 A/C
(frequency)		 C/C
(frequency)
 Caucasian
rs11925868 Scandinavia SZ
CTR		 0.14
0.15		 0.86
0.85		 15 (0.020)
29 (0.023)		 184 (0.241)
325 (0.255)		 566 (0.740)
920 (0.722)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele A-Allele T/T
(frequency)		 T/A
(frequency)		 A/A
(frequency)
 Caucasian
rs12053912 Scandinavia SZ
CTR		 0.18
0.17		 0.82
0.83		 25 (0.033)
37 (0.029)		 226 (0.295)
360 (0.282)		 514 (0.672)
878 (0.689)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs12629015 Scandinavia SZ
CTR		 0.18
0.19		 0.82
0.81		 25 (0.033)
46 (0.036)		 226 (0.295)
392 (0.308)		 514 (0.672)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs12634889 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs13080945 Scandinavia SZ
CTR		 0.01
0.02		 0.99
0.98		 0 (0.000)
1 (0.001)		 15 (0.020)
50 (0.039)		 750 (0.980)
1224 (0.960)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs1381841 Scandinavia SZ
CTR		 0.11
0.12		 0.89
0.88		 9 (0.012)
18 (0.014)		 150 (0.196)
269 (0.211)		 606 (0.792)
987 (0.775)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs1574154 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs16830720 Scandinavia SZ
CTR		 0.06
0.06		 0.94
0.94		 3 (0.004)
5 (0.004)		 86 (0.112)
144 (0.113)		 676 (0.884)
1126 (0.883)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs17204365 Scandinavia SZ
CTR		 0.03
0.03		 0.97
0.97		 1 (0.001)
1 (0.001)		 45 (0.059)
74 (0.058)		 720 (0.940)
1199 (0.941)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele A-Allele T/T
(frequency)		 T/A
(frequency)		 A/A
(frequency)
 Caucasian
rs17471 Scandinavia SZ
CTR		 0.10
0.09		 0.90
0.91		 8 (0.010)
10 (0.008)		 138 (0.180)
209 (0.164)		 620 (0.809)
1055 (0.828)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele C-Allele G/G
(frequency)		 G/C
(frequency)		 C/C
(frequency)
 Caucasian
rs1870931 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs2199503 Scandinavia SZ
CTR		 0.31
0.29		 0.69
0.71		 74 (0.097)
107 (0.084)		 327 (0.427)
525 (0.412)		 364 (0.476)
642 (0.504)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Caucasian
rs2873950 Scandinavia SZ
CTR		 0.19
0.18		 0.81
0.82		 28 (0.037)
41 (0.032)		 235 (0.307)
376 (0.295)		 502 (0.656)
857 (0.673)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs334538 Scandinavia SZ
CTR		 0.17
0.18		 0.83
0.82		 22 (0.029)
41 (0.032)		 216 (0.282)
376 (0.295)		 527 (0.689)
857 (0.673)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele A-Allele C/C
(frequency)		 C/A
(frequency)		 A/A
(frequency)
 Caucasian
rs334543 Scandinavia SZ
CTR		 0.32
0.30		 0.68
0.70		 78 (0.102)
115 (0.090)		 333 (0.435)
535 (0.420)		 354 (0.463)
624 (0.490)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs334547 Scandinavia SZ
CTR		 0.10
0.10		 0.90
0.90		 8 (0.010)
13 (0.010)		 138 (0.180)
229 (0.180)		 620 (0.809)
1032 (0.810)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele C-Allele A/A
(frequency)		 A/C
(frequency)		 C/C
(frequency)
 Caucasian
rs334550 Scandinavia SZ
CTR		 0.35
0.35		 0.65
0.65		 94 (0.123)
156 (0.122)		 348 (0.455)
580 (0.455)		 323 (0.422)
538 (0.422)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele C-Allele G/G
(frequency)		 G/C
(frequency)		 C/C
(frequency)
 Caucasian
rs334555 Scandinavia SZ
CTR		 0.16
0.15		 0.84
0.85		 20 (0.026)
29 (0.023)		 206 (0.269)
325 (0.255)		 540 (0.705)
920 (0.722)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs4340737 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs4688046 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs4688059 Scandinavia SZ
CTR		 0.19
0.18		 0.81
0.82		 28 (0.037)
41 (0.032)		 235 (0.307)
376 (0.295)		 502 (0.656)
857 (0.673)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs6438552 Scandinavia SZ
CTR		 0.37
0.39		 0.63
0.61		 105 (0.137)
194 (0.152)		 357 (0.466)
606 (0.476)		 304 (0.397)
474 (0.372)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs6797689 Scandinavia SZ
CTR		 0.06
0.07		 0.94
0.93		 3 (0.004)
6 (0.005)		 86 (0.112)
166 (0.130)		 676 (0.884)
1102 (0.865)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele A-Allele T/T
(frequency)		 T/A
(frequency)		 A/A
(frequency)
 Caucasian
rs6808874 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs749768 Scandinavia SZ
CTR		 0.30
0.30		 0.70
0.70		 69 (0.090)
115 (0.090)		 321 (0.420)
535 (0.420)		 375 (0.490)
624 (0.490)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele T-Allele A/A
(frequency)		 A/T
(frequency)		 T/T
(frequency)
 Caucasian
rs7639388 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs9861883 Scandinavia SZ
CTR		 0.19
0.19		 0.81
0.81		 28 (0.037)
46 (0.036)		 235 (0.307)
392 (0.308)		 502 (0.656)
836 (0.656)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele A-Allele T/T
(frequency)		 T/A
(frequency)		 A/A
(frequency)
 Caucasian
rs9872302 Scandinavia SZ
CTR		 0.16
0.16		 0.84
0.84		 20 (0.026)
33 (0.026)		 206 (0.269)
342 (0.268)		 540 (0.705)
899 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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