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Polymorphism Details
Study:
Ingason, 2010
Gene:
AHI1
(ORF1; JBTS3)
View on MSGene
Protein:
jouberin
(Ahi-1 isoform I; contatins SH3 and WD40 domains)
Chromosome:
6
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 21 October 2010
Total number of polymorphisms investigated by this study: 4
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Caucasian
rs9321501
Germany (Munich)
SZ
CTR
0.57
0.55
0.43
0.45
152 (0.306)
403 (0.317)
261 (0.526)
601 (0.472)
83 (0.167)
268 (0.211)
rs9321501
Denmark (SCOPE)
SZ
CTR
0.52
0.53
0.48
0.47
130 (0.288)
276 (0.280)
214 (0.473)
498 (0.506)
108 (0.239)
210 (0.213)
rs9321501
Norway (SCOPE)
SZ
CTR
0.52
0.53
0.48
0.47
68 (0.266)
53 (0.312)
129 (0.504)
75 (0.441)
59 (0.230)
42 (0.247)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
C-Allele
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
Caucasian
rs11154801
Germany (Munich)
SZ
CTR
0.35
0.35
0.65
0.65
55 (0.111)
162 (0.128)
237 (0.478)
574 (0.452)
204 (0.411)
534 (0.420)
rs11154801
UK-Scotland (SGENE+)
SZ
CTR
0.35
0.36
0.65
0.64
71 (0.108)
99 (0.150)
314 (0.477)
274 (0.415)
273 (0.415)
288 (0.436)
rs11154801
Germany-Bonn (SGENE+)
SZ
CTR
0.35
0.38
0.65
0.62
58 (0.120)
59 (0.161)
226 (0.468)
157 (0.429)
199 (0.412)
150 (0.410)
rs11154801
UK-England (SGENE+)
SZ
CTR
0.34
0.35
0.66
0.65
9 (0.097)
7 (0.080)
45 (0.484)
47 (0.534)
39 (0.419)
34 (0.386)
rs11154801
Finland-general (SGENE+)
SZ
CTR
0.33
0.32
0.67
0.68
5 (0.085)
14 (0.095)
29 (0.492)
65 (0.442)
25 (0.424)
68 (0.463)
rs11154801
Finland-isolate (SGENE+)
SZ
CTR
0.26
0.31
0.74
0.69
7 (0.057)
4 (0.080)
51 (0.415)
23 (0.460)
65 (0.528)
23 (0.460)
rs11154801
Iceland (SGENE+)
SZ
CTR
0.31
0.34
0.69
0.66
54 (0.092)
1339 (0.117)
263 (0.447)
5082 (0.442)
272 (0.462)
5070 (0.441)
rs11154801
Italy (SGENE+)
SZ
CTR
0.37
0.32
0.63
0.68
12 (0.143)
11 (0.124)
38 (0.452)
35 (0.393)
34 (0.405)
43 (0.483)
rs11154801
Netherlands (SGENE+)
SZ
CTR
0.33
0.38
0.67
0.62
66 (0.093)
87 (0.135)
344 (0.482)
318 (0.495)
303 (0.425)
238 (0.370)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Caucasian
rs2064430
UK-Scotland (SGENE+)
SZ
CTR
0.57
0.56
0.43
0.44
215 (0.327)
212 (0.321)
322 (0.490)
312 (0.472)
120 (0.183)
137 (0.207)
rs2064430
Germany-Bonn (SGENE+)
SZ
CTR
0.54
0.51
0.46
0.49
147 (0.304)
109 (0.297)
231 (0.478)
160 (0.436)
105 (0.217)
98 (0.267)
rs2064430
UK-England (SGENE+)
SZ
CTR
0.60
0.53
0.40
0.47
34 (0.374)
24 (0.279)
42 (0.462)
44 (0.512)
15 (0.165)
18 (0.209)
rs2064430
Finland-general (SGENE+)
SZ
CTR
0.58
0.61
0.42
0.39
18 (0.305)
52 (0.354)
32 (0.542)
74 (0.503)
9 (0.153)
21 (0.143)
rs2064430
Finland-isolate (SGENE+)
SZ
CTR
0.60
0.55
0.40
0.45
44 (0.364)
14 (0.286)
57 (0.471)
26 (0.531)
20 (0.165)
9 (0.184)
rs2064430
Iceland (SGENE+)
SZ
CTR
0.56
0.53
0.44
0.47
184 (0.313)
3186 (0.278)
291 (0.495)
5704 (0.498)
113 (0.192)
2564 (0.224)
rs2064430
Italy (SGENE+)
SZ
CTR
0.56
0.62
0.44
0.38
26 (0.310)
36 (0.404)
42 (0.500)
39 (0.438)
16 (0.190)
14 (0.157)
rs2064430
Netherlands (SGENE+)
SZ
CTR
0.57
0.52
0.43
0.48
229 (0.321)
164 (0.256)
361 (0.506)
341 (0.532)
123 (0.173)
136 (0.212)
Case-Control Studies (by ethnic group)
Genotypes
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
A-Allele
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
Caucasian
rs2757649
UK (Cardiff)
SZ
CTR
0.58
0.56
0.42
0.44
167 (0.349)
914 (0.311)
221 (0.461)
1447 (0.493)
91 (0.190)
575 (0.196)
SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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