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Printable
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Polymorphism Details
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Status: |
Updated 21 October 2010
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Total number of polymorphisms investigated by this study: 29 |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs4680 (Val108/158Met)
|
USA, Australia |
SZ CTR |
0.49 0.50 |
0.51 0.50 |
455 (0.243) 499 (0.249) |
935 (0.500) 1001 (0.500) |
481 (0.257) 503 (0.251) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs740603
|
USA, Australia |
SZ CTR |
0.48 0.46 |
0.52 0.54 |
425 (0.227) 431 (0.215) |
933 (0.499) 996 (0.498) |
511 (0.273) 575 (0.287) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs737866
|
USA, Australia |
SZ CTR |
0.29 0.30 |
0.71 0.70 |
154 (0.082) 175 (0.087) |
765 (0.409) 834 (0.417) |
951 (0.509) 992 (0.496) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs737865
|
USA, Australia |
SZ CTR |
0.28 0.29 |
0.72 0.71 |
150 (0.080) 165 (0.082) |
759 (0.406) 819 (0.409) |
961 (0.514) 1018 (0.508) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs4633 (62T/C)
|
USA, Australia |
SZ CTR |
0.49 0.50 |
0.51 0.50 |
445 (0.238) 495 (0.247) |
934 (0.500) 1001 (0.500) |
490 (0.262) 507 (0.253) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs3788319
|
USA, Australia |
SZ CTR |
0.49 0.47 |
0.51 0.53 |
453 (0.242) 438 (0.219) |
935 (0.500) 997 (0.498) |
483 (0.258) 567 (0.283) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs165599
|
USA, Australia |
SZ CTR |
0.31 0.31 |
0.69 0.69 |
174 (0.093) 197 (0.098) |
793 (0.424) 862 (0.431) |
903 (0.483) 942 (0.471) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs2020917
|
USA, Australia |
SZ CTR |
0.29 0.29 |
0.71 0.71 |
153 (0.082) 172 (0.086) |
764 (0.409) 829 (0.414) |
953 (0.510) 1001 (0.500) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs769224 (199G/A)
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USA, Australia |
SZ CTR |
0.02 0.02 |
0.98 0.98 |
1 (0.001) 1 (0.000) |
77 (0.041) 75 (0.037) |
1792 (0.958) 1927 (0.962) |
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs9332381
|
USA, Australia |
SZ CTR |
0.04 0.04 |
0.96 0.96 |
3 (0.002) 3 (0.001) |
137 (0.073) 154 (0.077) |
1731 (0.925) 1845 (0.922) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs9332377
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USA, Australia |
SZ CTR |
0.16 0.16 |
0.84 0.84 |
46 (0.025) 52 (0.026) |
495 (0.265) 541 (0.270) |
1329 (0.711) 1409 (0.704) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs9332347
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USA, Australia |
SZ CTR |
0.12 0.13 |
0.88 0.87 |
27 (0.014) 32 (0.016) |
398 (0.213) 441 (0.220) |
1445 (0.773) 1529 (0.764) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs740601
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USA, Australia |
SZ CTR |
0.40 0.41 |
0.60 0.59 |
302 (0.161) 340 (0.170) |
899 (0.481) 970 (0.485) |
669 (0.358) 692 (0.346) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
G-Allele |
T/T (frequency) |
T/G (frequency) |
G/G (frequency) |
Caucasian |
rs5993883
|
USA, Australia |
SZ CTR |
0.48 0.46 |
0.52 0.54 |
436 (0.233) 424 (0.212) |
934 (0.499) 995 (0.497) |
500 (0.267) 584 (0.292) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
T-Allele |
G/G (frequency) |
G/T (frequency) |
T/T (frequency) |
Caucasian |
rs5993882
|
USA, Australia |
SZ CTR |
0.22 0.24 |
0.78 0.76 |
92 (0.049) 112 (0.056) |
646 (0.345) 724 (0.362) |
1132 (0.605) 1166 (0.582) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs5746849
|
USA, Australia |
SZ CTR |
0.48 0.47 |
0.52 0.53 |
436 (0.233) 446 (0.223) |
934 (0.499) 998 (0.499) |
500 (0.267) 558 (0.279) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs4646318
|
USA, Australia |
SZ CTR |
0.05 0.05 |
0.95 0.95 |
4 (0.002) 4 (0.002) |
161 (0.086) 179 (0.089) |
1705 (0.912) 1818 (0.909) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs4646317
|
USA, Australia |
SZ CTR |
0.42 0.42 |
0.58 0.58 |
330 (0.176) 353 (0.176) |
911 (0.487) 975 (0.487) |
629 (0.336) 673 (0.336) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs4646316
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USA, Australia |
SZ CTR |
0.25 0.24 |
0.75 0.76 |
116 (0.062) 119 (0.059) |
699 (0.374) 739 (0.369) |
1055 (0.564) 1144 (0.571) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs4646312
|
USA, Australia |
SZ CTR |
0.40 0.41 |
0.60 0.59 |
302 (0.161) 332 (0.166) |
899 (0.481) 966 (0.483) |
669 (0.358) 704 (0.352) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs4646310
|
USA, Australia |
SZ CTR |
0.18 0.19 |
0.82 0.81 |
63 (0.034) 72 (0.036) |
559 (0.299) 616 (0.308) |
1248 (0.667) 1314 (0.656) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs3810595
|
USA, Australia |
SZ CTR |
0.40 0.41 |
0.60 0.59 |
305 (0.163) 338 (0.169) |
901 (0.482) 969 (0.484) |
664 (0.355) 695 (0.347) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs174699
|
USA, Australia |
SZ CTR |
0.06 0.05 |
0.94 0.95 |
7 (0.004) 6 (0.003) |
208 (0.111) 208 (0.104) |
1656 (0.885) 1788 (0.893) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs174675
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USA, Australia |
SZ CTR |
0.28 0.29 |
0.72 0.71 |
143 (0.076) 167 (0.083) |
749 (0.401) 823 (0.411) |
978 (0.523) 1012 (0.505) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
C-Allele |
A/A (frequency) |
A/C (frequency) |
C/C (frequency) |
Caucasian |
rs16982844
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USA, Australia |
SZ CTR |
0.07 0.07 |
0.93 0.93 |
10 (0.005) 9 (0.004) |
253 (0.135) 254 (0.127) |
1607 (0.859) 1739 (0.869) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs165774
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USA, Australia |
SZ CTR |
0.32 0.31 |
0.68 0.69 |
189 (0.101) 191 (0.095) |
811 (0.434) 855 (0.427) |
870 (0.465) 956 (0.478) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs165722
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USA, Australia |
SZ CTR |
0.49 0.49 |
0.51 0.51 |
451 (0.241) 489 (0.244) |
935 (0.500) 1001 (0.500) |
484 (0.259) 513 (0.256) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs165656
|
USA, Australia |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details). *Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
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Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs165728
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USA, Australia |
SZ CTR |
0.06 0.05 |
0.94 0.95 |
6 (0.003) 6 (0.003) |
201 (0.107) 208 (0.104) |
1663 (0.889) 1788 (0.893) |
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