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Polymorphism Details
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Status: |
Updated 21 October 2010
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Total number of polymorphisms investigated by this study: 21 |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs4680 (Val108/158Met)
|
USA |
SZ CTR |
0.49 0.50 |
0.51 0.50 |
114 (0.238) 124 (0.248) |
240 (0.502) 253 (0.505) |
124 (0.259) 124 (0.248) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs740603
|
USA |
SZ CTR |
0.40 0.42 |
0.60 0.58 |
45 (0.094) 48 (0.096) |
290 (0.607) 321 (0.641) |
143 (0.299) 132 (0.263) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs737865
|
USA |
SZ CTR |
0.32 0.29 |
0.68 0.71 |
45 (0.095) 41 (0.082) |
210 (0.443) 205 (0.411) |
219 (0.462) 253 (0.507) |
rs737865
|
Overlaps With Talkowski, 2008 |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs165599
|
USA |
SZ CTR |
0.31 0.31 |
0.69 0.69 |
44 (0.093) 44 (0.088) |
207 (0.436) 224 (0.448) |
224 (0.472) 232 (0.464) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs2020917
|
Overlaps With Talkowski, 2008 |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs6269
|
USA |
SZ CTR |
0.42 0.39 |
0.58 0.61 |
79 (0.166) 73 (0.146) |
241 (0.506) 245 (0.490) |
156 (0.328) 182 (0.364) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs9332381
|
USA |
SZ CTR |
0.04 0.05 |
0.96 0.95 |
0 (0.000) 2 (0.004) |
42 (0.088) 42 (0.084) |
436 (0.912) 457 (0.912) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs9332377
|
USA |
SZ CTR |
0.16 0.14 |
0.84 0.86 |
7 (0.015) 8 (0.016) |
142 (0.298) 126 (0.252) |
328 (0.688) 366 (0.732) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs4646316
|
USA |
SZ CTR |
0.24 0.24 |
0.76 0.76 |
29 (0.061) 27 (0.054) |
175 (0.366) 191 (0.381) |
274 (0.573) 283 (0.565) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs4646312
|
USA |
SZ CTR |
0.42 0.39 |
0.58 0.61 |
78 (0.164) 72 (0.144) |
240 (0.504) 243 (0.486) |
158 (0.332) 185 (0.370) |
rs4646312
|
Overlaps With Talkowski, 2008 |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs165774
|
USA |
SZ CTR |
0.32 0.31 |
0.68 0.69 |
48 (0.100) 47 (0.094) |
208 (0.435) 217 (0.434) |
222 (0.464) 236 (0.472) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs165722
|
Overlaps With Talkowski, 2008 |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs165656
|
USA |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs174696
|
USA |
SZ CTR |
0.21 0.24 |
0.79 0.76 |
19 (0.040) 31 (0.062) |
159 (0.333) 181 (0.363) |
300 (0.628) 287 (0.575) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C (frequency) |
C/G (frequency) |
G/G (frequency) |
Caucasian |
rs4646315
|
USA |
SZ CTR |
0.17 0.17 |
0.83 0.83 |
15 (0.031) 16 (0.032) |
132 (0.276) 140 (0.279) |
331 (0.692) 345 (0.689) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs933271
|
USA |
SZ CTR |
0.28 0.28 |
0.72 0.72 |
34 (0.071) 42 (0.084) |
196 (0.411) 194 (0.387) |
247 (0.518) 265 (0.529) |
rs933271
|
Overlaps With Talkowski, 2008 |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs2239393
|
USA |
SZ CTR |
0.42 0.39 |
0.58 0.61 |
79 (0.166) 73 (0.146) |
241 (0.505) 245 (0.490) |
157 (0.329) 182 (0.364) |
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs4680 (Val108/158Met)
|
USA |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs740603
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs737865
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs737865
|
USA |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs4633 (62T/C)
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs2020917
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs2020917
|
USA |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs4818 (136C/G)
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs9332381
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs9332377
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs740601
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs4646316
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs4646312
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs4646312
|
USA |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs165774
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs165722
|
USA |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs165656
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs174696
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C (frequency) |
C/G (frequency) |
G/G (frequency) |
Caucasian |
rs4646315
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C (frequency) |
C/G (frequency) |
G/G (frequency) |
Caucasian |
rs7290221
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs933271
|
Bulgaria |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs933271
|
USA |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
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