|
|
|
|
|
Printable
version
|
|
Polymorphism Details
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Status: |
Updated 28 October 2008
|
|
|
|
|
Total number of polymorphisms investigated by this study: 27 |
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs11757447
|
USA, Australia |
SZ CTR |
0.20 0.22 |
0.80 0.78 |
77 (0.041) 93 (0.046) |
605 (0.324) 678 (0.339) |
1188 (0.635) 1231 (0.615) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs1044083
|
USA, Australia |
SZ CTR |
0.23 0.21 |
0.77 0.79 |
97 (0.052) 90 (0.045) |
658 (0.352) 669 (0.334) |
1114 (0.596) 1243 (0.621) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs3813357
|
USA, Australia |
SZ CTR |
0.23 0.21 |
0.77 0.79 |
98 (0.052) 90 (0.045) |
660 (0.353) 669 (0.334) |
1112 (0.595) 1243 (0.621) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs1856352
|
USA, Australia |
SZ CTR |
0.05 0.05 |
0.95 0.95 |
5 (0.003) 6 (0.003) |
181 (0.097) 208 (0.104) |
1684 (0.901) 1788 (0.893) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs3183732
|
USA, Australia |
SZ CTR |
0.29 0.32 |
0.71 0.68 |
158 (0.084) 206 (0.103) |
772 (0.413) 873 (0.436) |
940 (0.503) 923 (0.461) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
G-Allele |
T/T (frequency) |
T/G (frequency) |
G/G (frequency) |
Caucasian |
rs3800204
|
USA, Australia |
SZ CTR |
0.20 0.22 |
0.80 0.78 |
78 (0.042) 93 (0.046) |
607 (0.325) 676 (0.337) |
1185 (0.634) 1234 (0.616) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs12207033
|
USA, Australia |
SZ CTR |
0.09 0.10 |
0.91 0.90 |
14 (0.007) 22 (0.011) |
297 (0.159) 376 (0.188) |
1559 (0.834) 1604 (0.801) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs3757298
|
USA, Australia |
SZ CTR |
0.09 0.10 |
0.91 0.90 |
14 (0.007) 21 (0.010) |
294 (0.157) 370 (0.185) |
1562 (0.835) 1611 (0.805) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs3757299
|
USA, Australia |
SZ CTR |
0.23 0.21 |
0.77 0.79 |
96 (0.051) 90 (0.045) |
656 (0.351) 669 (0.334) |
1117 (0.598) 1243 (0.621) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
C-Allele |
A/A (frequency) |
A/C (frequency) |
C/C (frequency) |
Caucasian |
rs7758872
|
USA, Australia |
SZ CTR |
0.42 0.41 |
0.58 0.59 |
335 (0.179) 338 (0.169) |
913 (0.488) 969 (0.484) |
623 (0.333) 695 (0.347) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs3765577
|
USA, Australia |
SZ CTR |
0.20 0.22 |
0.80 0.78 |
77 (0.041) 93 (0.046) |
605 (0.324) 678 (0.339) |
1188 (0.635) 1231 (0.615) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C (frequency) |
C/G (frequency) |
G/G (frequency) |
Caucasian |
rs9483455
|
USA, Australia |
SZ CTR |
0.20 0.22 |
0.80 0.78 |
77 (0.041) 93 (0.046) |
605 (0.324) 678 (0.339) |
1188 (0.635) 1231 (0.615) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs17191957
|
USA, Australia |
SZ CTR |
0.04 0.04 |
0.96 0.96 |
3 (0.002) 3 (0.001) |
154 (0.082) 154 (0.077) |
1713 (0.916) 1845 (0.922) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
A-Allele |
T/T (frequency) |
T/A (frequency) |
A/A (frequency) |
Caucasian |
rs9321344
|
USA, Australia |
SZ CTR |
0.20 0.22 |
0.80 0.78 |
77 (0.041) 93 (0.046) |
605 (0.324) 678 (0.339) |
1188 (0.635) 1231 (0.615) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs9321345
|
USA, Australia |
SZ CTR |
0.49 0.48 |
0.51 0.52 |
442 (0.236) 452 (0.226) |
934 (0.499) 998 (0.499) |
494 (0.264) 552 (0.276) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs9321346
|
USA, Australia |
SZ CTR |
0.43 0.42 |
0.57 0.58 |
352 (0.188) 353 (0.176) |
919 (0.491) 975 (0.487) |
599 (0.320) 673 (0.336) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs9483457
|
USA, Australia |
SZ CTR |
0.21 0.22 |
0.79 0.78 |
79 (0.042) 93 (0.046) |
612 (0.327) 678 (0.339) |
1179 (0.630) 1231 (0.615) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs9483458
|
USA, Australia |
SZ CTR |
0.20 0.22 |
0.80 0.78 |
78 (0.042) 94 (0.047) |
607 (0.325) 680 (0.340) |
1185 (0.634) 1227 (0.613) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs2788942
|
USA, Australia |
SZ CTR |
0.40 0.40 |
0.60 0.60 |
293 (0.157) 317 (0.158) |
895 (0.479) 959 (0.479) |
682 (0.365) 726 (0.363) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs2842885
|
USA, Australia |
SZ CTR |
0.42 0.40 |
0.58 0.60 |
336 (0.180) 327 (0.163) |
913 (0.488) 964 (0.482) |
620 (0.332) 711 (0.355) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs2842884
|
USA, Australia |
SZ CTR |
0.42 0.40 |
0.58 0.60 |
333 (0.178) 325 (0.162) |
912 (0.488) 963 (0.481) |
625 (0.334) 714 (0.357) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs6939077
|
USA, Australia |
SZ CTR |
0.04 0.04 |
0.96 0.96 |
3 (0.002) 4 (0.002) |
147 (0.079) 172 (0.086) |
1720 (0.920) 1826 (0.912) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs3813356
|
USA, Australia |
SZ CTR |
0.46 0.44 |
0.54 0.56 |
392 (0.210) 395 (0.197) |
928 (0.497) 988 (0.494) |
549 (0.294) 619 (0.309) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs4470875
|
USA, Australia |
SZ CTR |
0.08 0.09 |
0.92 0.91 |
11 (0.006) 17 (0.008) |
266 (0.142) 338 (0.169) |
1593 (0.852) 1647 (0.823) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs1591811
|
USA, Australia |
SZ CTR |
0.36 0.35 |
0.64 0.65 |
248 (0.133) 252 (0.126) |
866 (0.463) 917 (0.458) |
756 (0.404) 833 (0.416) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs2153177
|
USA, Australia |
SZ CTR |
0.42 0.42 |
0.58 0.58 |
331 (0.177) 357 (0.178) |
912 (0.488) 977 (0.488) |
627 (0.335) 669 (0.334) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs9493355
|
USA, Australia |
SZ CTR |
0.19 0.20 |
0.81 0.80 |
68 (0.036) 78 (0.039) |
576 (0.308) 633 (0.316) |
1227 (0.656) 1291 (0.645) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
|
|
|
|
|
|
|
|
|
|