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Polymorphism Details     
Back Search Methods Disclaimer Credits
 Study: Otnaess, 2009
 Gene: NTRK3  (TRKC; gp145(trkC))  Entrez Gene
 Protein: neurotrophic tyrosine kinase, receptor, type 3  (ETV6-NTRK3 fusion; OTTHUMP00000192915; neurotrophin 3 receptor; tyrosine kinase receptor C; NT-3 growth factor receptor; ETS related protein-neurotrophic receptor tyrosine kinase fusion protein)  ProteinLink
 Chromosome: 15   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 17 April 2009
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 33

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs4887342 Norway SZ
CTR
0.41
0.42
0.59
0.58
28 (0.172)
31 (0.175)
79 (0.485)
86 (0.486)
56 (0.344)
60 (0.339)
rs4887342 Denmark SZ
CTR
0.43
0.46
0.57
0.54
79 (0.189)
208 (0.207)
206 (0.492)
498 (0.496)
134 (0.320)
298 (0.297)
rs4887342 Sweden SZ
CTR
0.51
0.48
0.49
0.52
67 (0.261)
69 (0.236)
129 (0.502)
145 (0.497)
61 (0.237)
78 (0.267)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs16941103 Sweden SZ
CTR
0.41
0.45
0.59
0.55
44 (0.171)
59 (0.202)
125 (0.486)
144 (0.493)
88 (0.342)
89 (0.305)
rs16941103 Denmark SZ
CTR
0.44
0.42
0.56
0.58
81 (0.193)
179 (0.178)
207 (0.494)
490 (0.488)
131 (0.313)
335 (0.334)
rs16941103 Norway SZ
CTR
0.44
0.39
0.56
0.61
31 (0.190)
27 (0.153)
81 (0.497)
85 (0.480)
51 (0.313)
65 (0.367)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs8030107 Norway SZ
CTR
0.44
0.39
0.56
0.61
32 (0.198)
27 (0.153)
80 (0.494)
85 (0.480)
50 (0.309)
65 (0.367)
rs8030107 Denmark SZ
CTR
0.44
0.45
0.56
0.55
80 (0.191)
202 (0.201)
207 (0.494)
497 (0.495)
132 (0.315)
305 (0.304)
rs8030107 Sweden SZ
CTR
0.44
0.47
0.56
0.53
50 (0.195)
65 (0.223)
126 (0.490)
146 (0.500)
81 (0.315)
81 (0.277)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs11073758 Sweden SZ
CTR
0.44
0.48
0.56
0.52
49 (0.191)
69 (0.236)
127 (0.494)
145 (0.497)
81 (0.315)
78 (0.267)
rs11073758 Denmark SZ
CTR
0.44
0.45
0.56
0.55
80 (0.191)
204 (0.203)
206 (0.492)
497 (0.495)
133 (0.317)
303 (0.302)
rs11073758 Norway SZ
CTR
0.45
0.39
0.55
0.61
33 (0.202)
27 (0.153)
81 (0.497)
84 (0.475)
49 (0.301)
66 (0.373)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs10468138 Norway SZ
CTR
0.44
0.40
0.56
0.60
32 (0.196)
28 (0.158)
81 (0.497)
85 (0.480)
50 (0.307)
64 (0.362)
rs10468138 Denmark SZ
CTR
0.44
0.43
0.56
0.57
80 (0.191)
183 (0.182)
207 (0.494)
492 (0.490)
132 (0.315)
329 (0.328)
rs10468138 Sweden SZ
CTR
0.42
0.44
0.58
0.56
45 (0.175)
57 (0.195)
125 (0.486)
144 (0.493)
87 (0.339)
91 (0.312)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs999905 Sweden SZ
CTR
0.30
0.38
0.70
0.62
24 (0.093)
42 (0.144)
108 (0.420)
138 (0.473)
125 (0.486)
112 (0.384)
rs999905 Denmark SZ
CTR
0.29
0.32
0.71
0.68
36 (0.086)
101 (0.101)
174 (0.415)
435 (0.433)
209 (0.499)
468 (0.466)
rs999905 Norway SZ
CTR
0.29
0.29
0.71
0.71
14 (0.086)
15 (0.085)
67 (0.411)
72 (0.407)
82 (0.503)
90 (0.508)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs4887348 Norway SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4887348 Denmark SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4887348 Sweden SZ
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele A-Allele C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
 Caucasian
rs12594283 Sweden SZ
CTR
0.29
0.35
0.71
0.65
22 (0.086)
35 (0.120)
105 (0.409)
133 (0.455)
130 (0.506)
124 (0.425)
rs12594283 Denmark SZ
CTR
0.30
0.31
0.70
0.69
38 (0.091)
95 (0.095)
176 (0.420)
427 (0.425)
205 (0.489)
482 (0.480)
rs12594283 Norway SZ
CTR
0.28
0.25
0.72
0.75
12 (0.074)
11 (0.062)
66 (0.405)
68 (0.384)
85 (0.521)
98 (0.554)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs3784432 Norway SZ
CTR
0.35
0.29
0.65
0.71
20 (0.123)
15 (0.085)
74 (0.454)
73 (0.415)
69 (0.423)
88 (0.500)
rs3784432 Denmark SZ
CTR
0.36
0.35
0.64
0.65
53 (0.126)
120 (0.120)
192 (0.458)
455 (0.453)
174 (0.415)
429 (0.427)
rs3784432 Sweden SZ
CTR
0.35
0.38
0.65
0.63
31 (0.121)
41 (0.140)
116 (0.451)
137 (0.469)
110 (0.428)
114 (0.390)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs6496460 Sweden SZ
CTR
0.26
0.30
0.74
0.70
17 (0.066)
27 (0.092)
98 (0.381)
124 (0.425)
142 (0.553)
141 (0.483)
rs6496460 Denmark SZ
CTR
0.26
0.26
0.74
0.74
28 (0.067)
70 (0.070)
161 (0.384)
391 (0.389)
230 (0.549)
543 (0.541)
rs6496460 Norway SZ
CTR
0.25
0.22
0.75
0.78
10 (0.061)
9 (0.051)
60 (0.368)
61 (0.345)
93 (0.571)
107 (0.605)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs1948066 Norway SZ
CTR
0.29
0.27
0.71
0.73
14 (0.086)
13 (0.073)
68 (0.417)
70 (0.395)
81 (0.497)
94 (0.531)
rs1948066 Denmark SZ
CTR
0.30
0.31
0.70
0.69
38 (0.091)
96 (0.096)
176 (0.420)
429 (0.427)
205 (0.489)
479 (0.477)
rs1948066 Sweden SZ
CTR
0.28
0.33
0.72
0.67
20 (0.078)
32 (0.110)
103 (0.401)
129 (0.442)
134 (0.521)
131 (0.449)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs4887350 Sweden SZ
CTR
0.26
0.31
0.74
0.69
18 (0.070)
28 (0.096)
100 (0.389)
124 (0.425)
139 (0.541)
140 (0.479)
rs4887350 Denmark SZ
CTR
0.28
0.27
0.72
0.73
32 (0.076)
73 (0.073)
168 (0.401)
396 (0.394)
219 (0.523)
535 (0.533)
rs4887350 Norway SZ
CTR
0.27
0.23
0.73
0.77
12 (0.074)
9 (0.051)
65 (0.399)
63 (0.356)
86 (0.528)
105 (0.593)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   T-Allele G-Allele T/T
(frequency)
T/G
(frequency)
G/G
(frequency)
 Caucasian
rs8035265 Norway SZ
CTR
0.40
0.33
0.60
0.67
26 (0.160)
19 (0.107)
78 (0.479)
78 (0.441)
59 (0.362)
80 (0.452)
rs8035265 Denmark SZ
CTR
0.36
0.37
0.64
0.63
55 (0.131)
134 (0.133)
194 (0.463)
466 (0.464)
170 (0.406)
404 (0.402)
rs8035265 Sweden SZ
CTR
0.37
0.35
0.63
0.65
36 (0.140)
36 (0.123)
120 (0.467)
134 (0.459)
101 (0.393)
122 (0.418)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs12595249 Sweden SZ
CTR
0.37
0.35
0.63
0.65
35 (0.136)
35 (0.120)
120 (0.467)
133 (0.455)
102 (0.397)
124 (0.425)
rs12595249 Denmark SZ
CTR
0.37
0.35
0.63
0.65
57 (0.136)
124 (0.124)
195 (0.465)
457 (0.455)
167 (0.399)
423 (0.421)
rs12595249 Norway SZ
CTR
0.32
0.37
0.68
0.63
17 (0.104)
24 (0.136)
71 (0.436)
82 (0.463)
75 (0.460)
71 (0.401)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs3825885 Norway SZ
CTR
0.27
0.32
0.73
0.68
12 (0.074)
18 (0.102)
64 (0.393)
77 (0.435)
87 (0.534)
82 (0.463)
rs3825885 Denmark SZ
CTR
0.31
0.29
0.69
0.71
41 (0.098)
83 (0.083)
180 (0.430)
411 (0.409)
198 (0.473)
510 (0.508)
rs3825885 Sweden SZ
CTR
0.33
0.32
0.67
0.68
28 (0.109)
29 (0.099)
114 (0.444)
126 (0.432)
115 (0.447)
137 (0.469)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele T-Allele G/G
(frequency)
G/T
(frequency)
T/T
(frequency)
 Caucasian
rs16941212 Sweden SZ
CTR
0.42
0.40
0.58
0.60
45 (0.175)
46 (0.158)
125 (0.486)
141 (0.483)
87 (0.339)
105 (0.360)
rs16941212 Denmark SZ
CTR
0.41
0.40
0.59
0.60
69 (0.165)
162 (0.161)
202 (0.482)
482 (0.480)
148 (0.353)
360 (0.359)
rs16941212 Norway SZ
CTR
0.39
0.47
0.61
0.53
25 (0.153)
38 (0.215)
78 (0.479)
89 (0.503)
60 (0.368)
50 (0.282)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs8035178 Norway SZ
CTR
0.43
0.50
0.57
0.50
30 (0.184)
44 (0.249)
79 (0.485)
89 (0.503)
54 (0.331)
44 (0.249)
rs8035178 Denmark SZ
CTR
0.47
0.47
0.53
0.53
94 (0.224)
217 (0.216)
209 (0.499)
500 (0.498)
116 (0.277)
287 (0.286)
rs8035178 Sweden SZ
CTR
0.45
0.47
0.55
0.53
52 (0.202)
63 (0.216)
128 (0.498)
146 (0.500)
77 (0.300)
83 (0.284)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs7174354 Sweden SZ
CTR
0.45
0.47
0.55
0.53
52 (0.202)
66 (0.226)
128 (0.498)
145 (0.497)
77 (0.300)
81 (0.277)
rs7174354 Denmark SZ
CTR
0.46
0.46
0.54
0.54
88 (0.210)
211 (0.210)
209 (0.499)
499 (0.497)
122 (0.291)
294 (0.293)
rs7174354 Norway SZ
CTR
0.44
0.51
0.56
0.49
32 (0.196)
47 (0.266)
80 (0.491)
88 (0.497)
51 (0.313)
42 (0.237)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs11073763 Norway SZ
CTR
0.45
0.39
0.55
0.61
34 (0.209)
27 (0.153)
80 (0.491)
84 (0.475)
49 (0.301)
66 (0.373)
rs11073763 Denmark SZ
CTR
0.41
0.41
0.59
0.59
69 (0.165)
170 (0.169)
202 (0.482)
486 (0.484)
148 (0.353)
348 (0.347)
rs11073763 Sweden SZ
CTR
0.44
0.41
0.56
0.59
49 (0.191)
49 (0.168)
126 (0.490)
142 (0.486)
82 (0.319)
101 (0.346)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs7168277 Sweden SZ
CTR
0.37
0.36
0.63
0.64
35 (0.136)
38 (0.130)
121 (0.471)
134 (0.459)
101 (0.393)
120 (0.411)
rs7168277 Denmark SZ
CTR
0.36
0.36
0.64
0.64
53 (0.126)
129 (0.128)
192 (0.458)
462 (0.460)
174 (0.415)
413 (0.411)
rs7168277 Norway SZ
CTR
0.34
0.44
0.66
0.56
19 (0.117)
34 (0.192)
72 (0.442)
88 (0.497)
72 (0.442)
55 (0.311)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele A-Allele C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
 Caucasian
rs4887361 Norway SZ
CTR
0.25
0.20
0.75
0.80
11 (0.067)
7 (0.040)
61 (0.374)
58 (0.328)
91 (0.558)
112 (0.633)
rs4887361 Denmark SZ
CTR
0.26
0.28
0.74
0.72
29 (0.069)
76 (0.076)
163 (0.389)
401 (0.399)
227 (0.542)
527 (0.525)
rs4887361 Sweden SZ
CTR
0.21
0.27
0.79
0.73
12 (0.047)
22 (0.075)
86 (0.335)
116 (0.397)
159 (0.619)
154 (0.527)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs3784407 Sweden SZ
CTR
0.46
0.40
0.54
0.60
54 (0.210)
46 (0.158)
128 (0.498)
140 (0.479)
75 (0.292)
106 (0.363)
rs3784407 Denmark SZ
CTR
0.41
0.41
0.59
0.59
71 (0.169)
165 (0.164)
203 (0.484)
484 (0.482)
145 (0.346)
355 (0.354)
rs3784407 Norway SZ
CTR
0.44
0.39
0.56
0.61
31 (0.190)
27 (0.153)
80 (0.491)
84 (0.475)
52 (0.319)
66 (0.373)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs10163123 Norway SZ
CTR
0.27
0.35
0.73
0.65
12 (0.074)
22 (0.124)
65 (0.399)
81 (0.458)
86 (0.528)
74 (0.418)
rs10163123 Denmark SZ
CTR
0.26
0.27
0.74
0.73
29 (0.069)
73 (0.073)
163 (0.389)
395 (0.393)
227 (0.542)
536 (0.534)
rs10163123 Sweden SZ
CTR
0.29
0.29
0.71
0.71
21 (0.082)
24 (0.082)
105 (0.409)
119 (0.408)
131 (0.510)
149 (0.510)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs2059588 Sweden SZ
CTR
0.47
0.51
0.53
0.49
58 (0.226)
75 (0.257)
128 (0.498)
146 (0.500)
71 (0.276)
71 (0.243)
rs2059588 Denmark SZ
CTR
0.47
0.48
0.53
0.52
94 (0.224)
231 (0.230)
209 (0.499)
501 (0.499)
116 (0.277)
272 (0.271)
rs2059588 Norway SZ
CTR
0.48
0.51
0.52
0.49
38 (0.233)
46 (0.260)
82 (0.503)
88 (0.497)
43 (0.264)
43 (0.243)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs12594538 Norway SZ
CTR
0.25
0.30
0.75
0.70
10 (0.061)
16 (0.090)
61 (0.374)
74 (0.418)
92 (0.564)
87 (0.492)
rs12594538 Denmark SZ
CTR
0.21
0.22
0.79
0.78
19 (0.045)
49 (0.049)
141 (0.337)
347 (0.346)
259 (0.618)
608 (0.606)
rs12594538 Sweden SZ
CTR
0.25
0.23
0.75
0.77
16 (0.062)
16 (0.055)
96 (0.374)
105 (0.360)
145 (0.564)
171 (0.586)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs7179806 Sweden SZ
CTR
0.22
0.26
0.78
0.74
12 (0.047)
20 (0.068)
88 (0.342)
112 (0.384)
157 (0.611)
160 (0.548)
rs7179806 Denmark SZ
CTR
0.24
0.26
0.76
0.74
24 (0.057)
66 (0.066)
153 (0.365)
384 (0.382)
242 (0.578)
554 (0.552)
rs7179806 Norway SZ
CTR
0.25
0.20
0.75
0.80
10 (0.061)
7 (0.040)
62 (0.380)
56 (0.316)
91 (0.558)
114 (0.644)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs1529323 Norway SZ
CTR
0.47
0.46
0.53
0.54
36 (0.221)
37 (0.209)
81 (0.497)
88 (0.497)
46 (0.282)
52 (0.294)
rs1529323 Denmark SZ
CTR
0.42
0.44
0.58
0.56
76 (0.181)
191 (0.190)
204 (0.487)
494 (0.492)
139 (0.332)
319 (0.318)
rs1529323 Sweden SZ
CTR
0.44
0.46
0.56
0.54
49 (0.191)
62 (0.212)
127 (0.494)
145 (0.497)
81 (0.315)
85 (0.291)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs1346164 Sweden SZ
CTR
0.33
0.31
0.67
0.69
28 (0.109)
28 (0.096)
113 (0.440)
125 (0.428)
116 (0.451)
139 (0.476)
rs1346164 Denmark SZ
CTR
0.29
0.29
0.71
0.71
35 (0.084)
85 (0.085)
172 (0.411)
414 (0.412)
212 (0.506)
505 (0.503)
rs1346164 Norway SZ
CTR
0.29
0.36
0.71
0.64
14 (0.086)
22 (0.124)
68 (0.417)
82 (0.463)
81 (0.497)
73 (0.412)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs1105962 Norway SZ
CTR
0.27
0.35
0.73
0.65
12 (0.074)
22 (0.124)
65 (0.399)
80 (0.452)
86 (0.528)
75 (0.424)
rs1105962 Denmark SZ
CTR
0.29
0.27
0.71
0.73
35 (0.084)
74 (0.074)
171 (0.408)
398 (0.396)
213 (0.508)
532 (0.530)
rs1105962 Sweden SZ
CTR
0.32
0.29
0.68
0.71
26 (0.101)
24 (0.082)
112 (0.436)
119 (0.408)
119 (0.463)
149 (0.510)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs11629691 Sweden SZ
CTR
0.39
0.41
0.61
0.59
40 (0.156)
50 (0.171)
123 (0.479)
142 (0.486)
94 (0.366)
100 (0.342)
rs11629691 Denmark SZ
CTR
0.40
0.39
0.60
0.61
68 (0.162)
154 (0.153)
202 (0.482)
478 (0.476)
149 (0.356)
372 (0.371)
rs11629691 Norway SZ
CTR
0.42
0.41
0.58
0.59
29 (0.178)
30 (0.169)
80 (0.491)
86 (0.486)
54 (0.331)
61 (0.345)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs7176520 Norway SZ
CTR
0.44
0.41
0.56
0.59
31 (0.190)
30 (0.169)
80 (0.491)
86 (0.486)
52 (0.319)
61 (0.345)
rs7176520 Denmark SZ
CTR
0.40
0.44
0.60
0.56
68 (0.162)
196 (0.195)
201 (0.480)
495 (0.493)
150 (0.358)
313 (0.312)
rs7176520 Sweden SZ
CTR
0.43
0.46
0.57
0.54
47 (0.183)
62 (0.212)
126 (0.490)
146 (0.500)
84 (0.327)
84 (0.288)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs16941563 Sweden SZ
CTR
0.28
0.33
0.72
0.67
21 (0.082)
31 (0.106)
104 (0.405)
128 (0.438)
132 (0.514)
133 (0.455)
rs16941563 Denmark SZ
CTR
0.30
0.33
0.70
0.67
37 (0.088)
112 (0.112)
175 (0.418)
447 (0.445)
207 (0.494)
445 (0.443)
rs16941563 Norway SZ
CTR
0.32
0.28
0.68
0.72
17 (0.104)
14 (0.079)
71 (0.436)
71 (0.401)
75 (0.460)
92 (0.520)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   C-Allele A-Allele C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
 Caucasian
rs4887400 Norway SZ
CTR
0.32
0.27
0.68
0.73
17 (0.104)
13 (0.073)
71 (0.436)
70 (0.395)
75 (0.460)
94 (0.531)
rs4887400 Denmark SZ
CTR
0.30
0.33
0.70
0.67
37 (0.088)
108 (0.108)
174 (0.415)
443 (0.441)
208 (0.496)
453 (0.451)
rs4887400 Sweden SZ
CTR
0.29
0.32
0.71
0.68
21 (0.082)
30 (0.103)
105 (0.409)
127 (0.435)
131 (0.510)
135 (0.462)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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