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Protein: |
oligodendrocyte lineage transcription factor 2
(protein kinase C binding protein 2; human protein kinase C-binding protein RACK17; basic domain, helix-loop-helix protein, class B, 1; oligodendrocyte-specific bHLH transcription factor 2)
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Status: |
Updated 22 October 2010
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Total number of polymorphisms investigated by this study: 16 |
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
G-Allele |
T/T (frequency) |
T/G (frequency) |
G/G (frequency) |
Caucasian |
rs2834070
|
UK, Ireland |
SZ CTR |
0.34 0.30 |
0.66 0.70 |
74 (0.117) 61 (0.089) |
286 (0.451) 286 (0.418) |
274 (0.432) 338 (0.493) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs9978551
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs11701698
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs6517135
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs1005573
|
UK, Ireland |
SZ CTR |
0.30 0.35 |
0.70 0.65 |
60 (0.091) 85 (0.120) |
278 (0.421) 322 (0.454) |
322 (0.488) 303 (0.427) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs762178
|
UK, Ireland |
SZ CTR |
0.39 0.45 |
0.61 0.55 |
97 (0.149) 144 (0.204) |
309 (0.474) 349 (0.495) |
246 (0.377) 212 (0.301) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs1059004
|
UK, Ireland |
SZ CTR |
0.40 0.47 |
0.60 0.53 |
103 (0.159) 156 (0.222) |
310 (0.480) 350 (0.497) |
233 (0.361) 198 (0.281) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs6517137
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
T-Allele |
G/G (frequency) |
G/T (frequency) |
T/T (frequency) |
Caucasian |
rs13046814
|
UK, Ireland |
SZ CTR |
0.39 0.34 |
0.61 0.66 |
102 (0.154) 80 (0.113) |
316 (0.477) 316 (0.445) |
244 (0.369) 314 (0.442) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C (frequency) |
C/G (frequency) |
G/G (frequency) |
Caucasian |
rs9653711
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
C-Allele |
A/A (frequency) |
A/C (frequency) |
C/C (frequency) |
Caucasian |
33322832C/A
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
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A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
33322853G/A
|
UK, Ireland |
SZ CTR |
0.20 0.19 |
0.80 0.81 |
26 (0.040) 26 (0.037) |
208 (0.316) 217 (0.310) |
424 (0.644) 456 (0.652) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
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T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs11701762
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes* |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C (frequency) |
C/G (frequency) |
G/G (frequency) |
Caucasian |
rs881666
|
UK, Ireland |
SZ CTR |
0.44 0.41 |
0.56 0.60 |
127 (0.194) 115 (0.164) |
323 (0.492) 337 (0.481) |
206 (0.314) 248 (0.354) |
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs762237
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs2834072
|
UK, Ireland |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
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