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Printable
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Polymorphism Details
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Gene: |
GAD1
(GAD; SCP)
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Status: |
Updated 22 October 2010
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Total number of polymorphisms investigated by this study: 19 |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs10191129 (hCV2177434)
|
USA (CBDB) |
SZ CTR |
0.24 0.23 |
0.76 0.77 |
15 (0.054) 16 (0.051) |
101 (0.365) 113 (0.362) |
161 (0.581) 183 (0.587) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs10432420 (hCV2177469)
|
USA (CBDB) |
SZ CTR |
0.30 0.31 |
0.70 0.69 |
30 (0.105) 28 (0.090) |
110 (0.385) 137 (0.442) |
146 (0.510) 145 (0.468) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs1978340 (hCV11637130)
|
USA (CBDB) |
SZ CTR |
0.32 0.29 |
0.68 0.71 |
26 (0.091) 25 (0.080) |
128 (0.449) 133 (0.428) |
131 (0.460) 153 (0.492) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs2241165
|
USA (CBDB) |
SZ CTR |
0.24 0.26 |
0.76 0.74 |
20 (0.065) 17 (0.059) |
106 (0.344) 113 (0.394) |
182 (0.591) 157 (0.547) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs2270335
|
USA (CBDB) |
SZ CTR |
0.24 0.26 |
0.76 0.74 |
18 (0.073) 16 (0.068) |
84 (0.341) 89 (0.376) |
144 (0.585) 132 (0.557) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs3749034 (hCV2177452)
|
USA (CBDB) |
SZ CTR |
0.23 0.24 |
0.77 0.76 |
19 (0.067) 19 (0.061) |
91 (0.320) 111 (0.358) |
174 (0.613) 180 (0.581) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs3791850
|
USA (CBDB) |
SZ CTR |
0.21 0.23 |
0.79 0.77 |
10 (0.043) 14 (0.061) |
79 (0.341) 75 (0.329) |
143 (0.616) 139 (0.610) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs3828275 (hCV2177441)
|
USA (CBDB) |
SZ CTR |
0.43 0.42 |
0.57 0.58 |
48 (0.169) 58 (0.186) |
146 (0.514) 144 (0.462) |
90 (0.317) 110 (0.353) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs701492 (hCV8823482)
|
USA (CBDB) |
SZ CTR |
0.30 0.29 |
0.70 0.71 |
30 (0.106) 26 (0.083) |
107 (0.378) 132 (0.422) |
146 (0.516) 155 (0.495) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs7557793 (hCV2177464)
|
USA (CBDB) |
SZ CTR |
0.23 0.27 |
0.77 0.73 |
22 (0.077) 23 (0.074) |
90 (0.314) 120 (0.388) |
175 (0.610) 166 (0.537) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs769390
|
USA (CBDB) |
SZ CTR |
0.27 0.27 |
0.73 0.73 |
26 (0.091) 20 (0.064) |
101 (0.352) 127 (0.408) |
160 (0.557) 164 (0.527) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs769395 (hCV8823522)
|
USA (CBDB) |
SZ CTR |
0.27 0.29 |
0.73 0.71 |
23 (0.082) 24 (0.076) |
105 (0.375) 134 (0.427) |
152 (0.543) 156 (0.497) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs872123
|
USA (CBDB) |
SZ CTR |
0.24 0.26 |
0.76 0.74 |
22 (0.076) 20 (0.064) |
95 (0.326) 120 (0.383) |
174 (0.598) 173 (0.553) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs3762556
|
USA (CBDB) |
SZ CTR |
0.34 0.34 |
0.66 0.66 |
27 (0.099) 29 (0.095) |
133 (0.485) 150 (0.492) |
114 (0.416) 126 (0.413) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C (frequency) |
C/G (frequency) |
G/G (frequency) |
Caucasian |
rs3762555
|
USA (CBDB) |
SZ CTR |
0.23 0.25 |
0.77 0.75 |
18 (0.063) 20 (0.064) |
96 (0.338) 116 (0.371) |
170 (0.599) 177 (0.565) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs3762553
|
USA (CBDB) |
SZ CTR |
0.30 0.29 |
0.70 0.71 |
24 (0.079) 23 (0.079) |
132 (0.433) 126 (0.432) |
149 (0.489) 143 (0.490) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs3749035
|
USA (CBDB) |
SZ CTR |
0.43 0.42 |
0.57 0.58 |
51 (0.166) 55 (0.190) |
162 (0.528) 132 (0.455) |
94 (0.306) 103 (0.355) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs2356236
|
USA (CBDB) |
SZ CTR |
0.34 0.35 |
0.66 0.65 |
30 (0.106) 34 (0.112) |
132 (0.468) 144 (0.475) |
120 (0.426) 125 (0.413) |
Case-Control Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs16823181
|
USA (CBDB) |
SZ CTR |
0.40 0.41 |
0.60 0.59 |
45 (0.158) 58 (0.184) |
140 (0.493) 140 (0.444) |
99 (0.349) 117 (0.371) |
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs10191129 (hCV2177434)
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs10191129 (hCV2177434)
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs10432420 (hCV2177469)
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs10432420 (hCV2177469)
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs1978340 (hCV11637130)
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs1978340 (hCV11637130)
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs2241165
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs2241165
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs2270335
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs2270335
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs3749034 (hCV2177452)
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs3749034 (hCV2177452)
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
A-Allele |
G-Allele |
A/A (frequency) |
A/G (frequency) |
G/G (frequency) |
Caucasian |
rs3791850
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USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs3791850
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs3828275 (hCV2177441)
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs3828275 (hCV2177441)
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
T-Allele |
C-Allele |
T/T (frequency) |
T/C (frequency) |
C/C (frequency) |
Caucasian |
rs701492 (hCV8823482)
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs701492 (hCV8823482)
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs7557793 (hCV2177464)
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs7557793 (hCV2177464)
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs769390
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs769390
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs769395 (hCV8823522)
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs769395 (hCV8823522)
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs872123
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs872123
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs3762556
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs3762556
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
G-Allele |
C/C (frequency) |
C/G (frequency) |
G/G (frequency) |
Caucasian |
rs3762555
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs3762555
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
C-Allele |
G/G (frequency) |
G/C (frequency) |
C/C (frequency) |
Caucasian |
rs3762553
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs3762553
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
A-Allele |
C/C (frequency) |
C/A (frequency) |
A/A (frequency) |
Caucasian |
rs3749035
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs3749035
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
G-Allele |
A-Allele |
G/G (frequency) |
G/A (frequency) |
A/A (frequency) |
Caucasian |
rs2356236
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs2356236
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
Family-Based Studies (by ethnic group) |
|
Genotypes |
Polymorphism ID# (Link to NCBI) |
Population |
|
C-Allele |
T-Allele |
C/C (frequency) |
C/T (frequency) |
T/T (frequency) |
Caucasian |
rs16823181
|
Overlaps with Straub, 2007 (CC) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
rs16823181
|
USA (NIMH-GI) |
SZ CTR |
- - |
- - |
0 (-) 0 (-) |
0 (-) 0 (-) |
0 (-) 0 (-) |
(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
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