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Polymorphism Details
Study:
Koide, 2010
Gene:
DPYSL2
(DRP2; CRMP2; DHPRP2)
Protein:
dihydropyrimidinase-like 2
(collapsin response mediator protein hCRMP-2)
Chromosome:
8
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 21 October 2010
Total number of polymorphisms investigated by this study: 20
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
rs708621 (1506T/C)
Japan (I)
SZ
CTR
0.33
0.31
0.67
0.69
42 (0.109)
37 (0.096)
170 (0.443)
164 (0.427)
172 (0.448)
183 (0.477)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
rs17666 (2236T/C)
Japan (I)
SZ
CTR
0.15
0.14
0.85
0.86
9 (0.023)
8 (0.021)
98 (0.255)
92 (0.240)
277 (0.721)
284 (0.740)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
rs327232
Japan (I)
SZ
CTR
0.20
0.24
0.80
0.76
15 (0.039)
22 (0.057)
123 (0.320)
140 (0.365)
246 (0.641)
222 (0.578)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
m-Allele
M-Allele
m/m
(frequency)
m/M
(frequency)
M/M
(frequency)
Asian
rs182748
Japan (I)
SZ
CTR
0.50
0.49
0.50
0.51
96 (0.250)
92 (0.240)
192 (0.500)
192 (0.500)
96 (0.250)
100 (0.260)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs403185
Japan (I)
SZ
CTR
0.39
0.36
0.61
0.64
58 (0.151)
50 (0.130)
183 (0.477)
177 (0.461)
143 (0.372)
157 (0.409)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
rs11863
Japan (I)
SZ
CTR
0.28
0.26
0.72
0.74
30 (0.078)
26 (0.068)
155 (0.404)
148 (0.385)
199 (0.518)
210 (0.547)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
rs13249543
Japan (I)
SZ
CTR
0.40
0.39
0.60
0.61
61 (0.159)
58 (0.151)
184 (0.480)
183 (0.477)
138 (0.360)
143 (0.372)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
C-Allele
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
Asian
rs1442337
Japan (I)
SZ
CTR
0.15
0.16
0.85
0.84
9 (0.023)
10 (0.026)
98 (0.255)
103 (0.268)
277 (0.721)
271 (0.706)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs17321828
Japan (I)
SZ
CTR
0.15
0.12
0.85
0.88
9 (0.023)
6 (0.016)
98 (0.255)
81 (0.211)
277 (0.721)
297 (0.773)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
rs1972921
Japan (I)
SZ
CTR
0.21
0.25
0.79
0.75
17 (0.044)
24 (0.063)
127 (0.331)
144 (0.375)
240 (0.625)
216 (0.563)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs2585458
Japan (I)
SZ
CTR
0.09
0.13
0.91
0.87
3 (0.008)
6 (0.016)
63 (0.164)
87 (0.227)
318 (0.828)
291 (0.758)
rs2585458
Japan (II)
SZ
CTR
0.12
0.11
0.88
0.89
16 (0.015)
11 (0.012)
228 (0.211)
181 (0.196)
836 (0.774)
733 (0.792)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
G-Allele
C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
Asian
rs327217
Japan (I)
SZ
CTR
0.10
0.12
0.90
0.88
4 (0.010)
6 (0.016)
69 (0.180)
81 (0.211)
311 (0.810)
297 (0.773)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs327221
Japan (I)
SZ
CTR
0.10
0.12
0.90
0.88
4 (0.010)
6 (0.016)
69 (0.180)
81 (0.211)
311 (0.810)
297 (0.773)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
G-Allele
A-Allele
G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
Asian
rs327233
Japan (I)
SZ
CTR
0.27
0.31
0.73
0.69
28 (0.073)
37 (0.096)
151 (0.393)
164 (0.427)
205 (0.534)
183 (0.477)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs371255
Japan (I)
SZ
CTR
0.25
0.25
0.75
0.75
24 (0.063)
24 (0.063)
144 (0.375)
144 (0.375)
216 (0.563)
216 (0.563)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
A-Allele
G-Allele
A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
Asian
rs4733013
Japan (I)
SZ
CTR
0.34
0.37
0.66
0.63
44 (0.115)
53 (0.138)
172 (0.449)
179 (0.466)
167 (0.436)
152 (0.396)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
rs4733033
Japan (I)
SZ
CTR
0.38
0.41
0.62
0.59
55 (0.143)
65 (0.169)
181 (0.471)
186 (0.483)
148 (0.385)
134 (0.348)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
rs4733048
Japan (I)
SZ
CTR
0.17
0.22
0.83
0.78
11 (0.029)
19 (0.049)
108 (0.281)
132 (0.343)
265 (0.690)
234 (0.608)
rs4733048
Japan (II)
SZ
CTR
0.18
0.19
0.82
0.81
35 (0.032)
33 (0.036)
319 (0.295)
285 (0.308)
726 (0.672)
608 (0.657)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
C-Allele
T-Allele
C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
Asian
rs7829347
Japan (I)
SZ
CTR
0.09
0.07
0.91
0.93
3 (0.008)
2 (0.005)
63 (0.164)
50 (0.130)
318 (0.828)
332 (0.865)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
Case-Control Studies (by ethnic group)
Genotypes*
Polymorphism ID#
(Link to NCBI)
Population
T-Allele
C-Allele
T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
Asian
rs920633
Japan (I)
SZ
CTR
0.46
0.44
0.54
0.56
81 (0.211)
74 (0.193)
191 (0.497)
189 (0.493)
112 (0.292)
120 (0.313)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
SZGene Recent Updates
SZGene Stats
Studies: 1727
Genes: 1008
Polymorphisms: 8788
Meta-analyses: 287
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An up-to-date collection of all published genetic association studies.
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